About: Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	We carried out molecular dynamics simulations of the base of the A-site finger from archaeal and three bacterial large subunits. The study showed that despite noticeable differences in the secondary structures, the studied segments adopt almost identical fold and exhibit similar stochastic fluctuations. Geometries of segments from the simulations correspond to structures obtained by Cryo-electron microscopy. We carried out molecular dynamics simulations of the base of the A-site finger from archaeal and three bacterial large subunits. The study showed that despite noticeable differences in the secondary structures, the studied segments adopt almost identical fold and exhibit similar stochastic fluctuations. Geometries of segments from the simulations correspond to structures obtained by Cryo-electron microscopy. (en)
Title	Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM (en)
skos:prefLabel	Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM (en)
skos:notation	RIV/68081707:_____/10:00373405!RIV12-MSM-68081707
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(1QS500040581), P(GA203/09/1476), P(IAA400040802), P(KJB400040901), P(LC06030), Z(AV0Z50040507), Z(AV0Z50040702), Z(MSM0021622413)
http://linked.open...iv/cisloPeriodika	4
http://linked.open...vai/riv/dodaniDat	2012
http://linked.open...aciTvurceVysledku	Rázga, Filip Šponer, Jiří Réblová, Kamila
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Biofyzikální ústav AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	255578
http://linked.open...ai/riv/idVysledku	RIV/68081707:_____/10:00373405
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	molecular dynamics; Cryo-electron microscopy; RNA (en)
http://linked.open.../riv/klicoveSlovo	Cryo-electron microscopy RNA molecular dynamics
http://linked.open...odStatuVydavatele	GB - Spojené království Velké Británie a Severního Irska
http://linked.open...ontrolniKodProRIV	[7082F49A2999]
http://linked.open...i/riv/nazevZdroje	Nucleic Acids Research
http://linked.open...in/vavai/riv/obor	BO
http://linked.open...ichTvurcuVysledku	3 (xsd:int)
http://linked.open...cetTvurcuVysledku	6 (xsd:int)
http://linked.open...vavai/riv/projekt	Metallodrugs, design and mechansim of action Biomolecular centre Structural dynamics, molecular interactions and function of key RNA motifs Structure, dynamics, and reaction mechanism of catalytic RNA Computational study of RNA multiple junctions localized in functionally important sites of the ribosome
http://linked.open...UplatneniVysledku	2010
http://linked.open...v/svazekPeriodika	38
http://linked.open...iv/tvurceVysledku	Li, W. Rázga, Filip Réblová, Kamila Šponer, Jiří Frank, J. Gao, H.
http://linked.open...ain/vavai/riv/wos	000275270500032
http://linked.open...n/vavai/riv/zamer	Biophysics of dynamic structures and functions of biological systems Genome and epigenome: 1D and 3D Structure, Dynamics, Interactions with Proteins and Functions Proteiny v metabolismu a při interakci organismů s prostředím
issn	0305-1048
number of pages	16 (xsd:int)
http://bibframe.org/vocab/doi	10.1093/nar/gkp1057
is http://linked.open...avai/riv/vysledek of	Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM

Faceted Search & Find service v1.16.116 as of Feb 22 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3239 as of Feb 22 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 82 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software