About: Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	V této práci, trans Watson-Crick/sugar edge rodina byla charakterizovaná kvantově-chemickými a molekulově-dynamickými výpočty. Geometrie pro plynnou fázi byly optimalizované DFT výpočty a RIMP2 interakční energie byly vykázané pro 10 krystalograficky identifikovaných trans WC/SE vzorků. Dále byly předpovězeny stabilní struktury všech zůstávajících 6-ti možných členů této rodiny, které dosud nebyly pozorované (cs) In this study, the trans Watson-Crick/sugar edge (trans WC/SE) RNA base pair family has been characterized using quantum chemical and molecular mechanics calculations. Gas-phase optimized geometries from density functional theory (DFT) calculations and RIMP2 interaction energies are reported for the 10 crystallographically identified trans WC/SE base pairing patterns. Further, stable structures are predicted for all of the remaining six possible members of this family not seen in RNAs so far. In this study, the trans Watson-Crick/sugar edge (trans WC/SE) RNA base pair family has been characterized using quantum chemical and molecular mechanics calculations. Gas-phase optimized geometries from density functional theory (DFT) calculations and RIMP2 interaction energies are reported for the 10 crystallographically identified trans WC/SE base pairing patterns. Further, stable structures are predicted for all of the remaining six possible members of this family not seen in RNAs so far. (en)
Title	Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs Principy RNA párování bází: struktury a energie trans Watson-Crick/ sugar edge párů bází (cs) Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs (en)
skos:prefLabel	Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs Principy RNA párování bází: struktury a energie trans Watson-Crick/ sugar edge párů bází (cs) Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs (en)
skos:notation	RIV/68081707:_____/05:00001190!RIV06-AV0-68081707
http://linked.open.../vavai/riv/strany	11399;11410
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GA203/05/0009), Z(AV0Z50040507)
http://linked.open...iv/cisloPeriodika	22
http://linked.open...vai/riv/dodaniDat	2006
http://linked.open...aciTvurceVysledku	Šponer, Judit E. Špačková, Naďa
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Biofyzikální ústav AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	538454
http://linked.open...ai/riv/idVysledku	RIV/68081707:_____/05:00001190
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	molecular dynamics; large ribosomal sub-unit; quantum chemical analysis (en)
http://linked.open.../riv/klicoveSlovo	molecular dynamics large ribosomal sub-unit quantum chemical analysis
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[76061861FA29]
http://linked.open...i/riv/nazevZdroje	Journal of Physical Chemistry B
http://linked.open...in/vavai/riv/obor	BO
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	3 (xsd:int)
http://linked.open...vavai/riv/projekt	Structure and dynamics of DNA nitrogeneous bases, base pairs, oligonucleotides and their complexes with water, ions and drugs
http://linked.open...UplatneniVysledku	2005
http://linked.open...v/svazekPeriodika	109
http://linked.open...iv/tvurceVysledku	Leszczynski, Jerzy Špačková, Naďa Šponer, Judit Erika
http://linked.open...n/vavai/riv/zamer	Biophysics of dynamic structures and functions of biological systems
issn	1520-6106
number of pages	12 (xsd:int)
is http://linked.open...avai/riv/vysledek of	Principles of RNA base pairing: Structures and energies of the trans Watson-Crick/sugar edge base pairs

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