About: Architecture model for approximate palindrome detection

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Understanding the structure and function of DNA sequences represents an important area of research in modern biology. One of the interesting structures occurring in DNA is a palindrome. Biologists believe that palindromes play an important role in regulation of gene activity and other cell processes because they are often observed near promoters, introns and specific untranslated regions. Unfortunately, the time complexity of algorithms for palindrome detection increases when mutations in the form of character insertions, deletions or substitutions are taken into consideration. In recent years, several works have been aimed at acceleration of such algorithms using dedicated circuits capable of potentially large-scale searching. However, widespread use of such circuits is often complicated by varying user task details or the need to use a specific target platform. The objective of this work is therefore to create a model of hardware architecture for approximate palindrome detection and develop a techni Understanding the structure and function of DNA sequences represents an important area of research in modern biology. One of the interesting structures occurring in DNA is a palindrome. Biologists believe that palindromes play an important role in regulation of gene activity and other cell processes because they are often observed near promoters, introns and specific untranslated regions. Unfortunately, the time complexity of algorithms for palindrome detection increases when mutations in the form of character insertions, deletions or substitutions are taken into consideration. In recent years, several works have been aimed at acceleration of such algorithms using dedicated circuits capable of potentially large-scale searching. However, widespread use of such circuits is often complicated by varying user task details or the need to use a specific target platform. The objective of this work is therefore to create a model of hardware architecture for approximate palindrome detection and develop a techni (en)
Title	Architecture model for approximate palindrome detection Architecture model for approximate palindrome detection (en)
skos:prefLabel	Architecture model for approximate palindrome detection Architecture model for approximate palindrome detection (en)
skos:notation	RIV/00216305:26230/09:PU82600!RIV11-GA0-26230___
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GA204/08/1560), Z(MSM0021630528)
http://linked.open...vai/riv/dodaniDat	2011
http://linked.open...aciTvurceVysledku	Voženílek, Jan Martínek, Tomáš Lexa, Matej
http://linked.open.../riv/druhVysledku	D - Článek ve sborníku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Vysoké učení technické v Brně / Fakulta informačních technologií
http://linked.open...dnocenehoVysledku	303993
http://linked.open...ai/riv/idVysledku	RIV/00216305:26230/09:PU82600
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	approximate palindrome detection, architecture model, Virtex5, FPGA<br> (en)
http://linked.open.../riv/klicoveSlovo	Virtex5 architecture model approximate palindrome detection FPGA<br>
http://linked.open...ontrolniKodProRIV	[4C9F52D6D56C]
http://linked.open...v/mistoKonaniAkce	Liberec
http://linked.open...i/riv/mistoVydani	Liberec
http://linked.open...i/riv/nazevZdroje	2009 IEEE Symposium on Design and Diagnostics of Electronic Circuits and Systems
http://linked.open...in/vavai/riv/obor	JC
http://linked.open...ichTvurcuVysledku	3 (xsd:int)
http://linked.open...cetTvurcuVysledku	3 (xsd:int)
http://linked.open...vavai/riv/projekt	In vitro and in silico identification of non-canonical DNA structures in genomic DNA sequences
http://linked.open...UplatneniVysledku	2009
http://linked.open...iv/tvurceVysledku	Lexa, Matej Martínek, Tomáš Voženílek, Jan
http://linked.open...vavai/riv/typAkce	WRD - Světová
http://linked.open.../riv/zahajeniAkce	2009-04-15 (xsd:date)
http://linked.open...n/vavai/riv/zamer	Výzkum informačních technologií z hlediska bezpečnosti
number of pages	6 (xsd:int)
http://purl.org/ne...btex#hasPublisher	IEEE Computer Society
https://schema.org/isbn	978-1-4244-3339-1
http://localhost/t...ganizacniJednotka	26230
is http://linked.open...avai/riv/vysledek of	Architecture model for approximate palindrome detection Architecture model for approximate palindrome detection Architecture model for approximate palindrome detection

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