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  • In this paper we present a new approach to the processing of molecule dynamics. The method performs the tracking of a channel in a sequence of molecule snapshots which represent atom positions in the molecule in certain time intervals. The centerline of the tracked channel is refined using the Delaunay triangulation from the actual snapshot resulting in a new optimized centerline. This method allows us easily to animate the behaviour of the channel in the sequence. The method can also be used to detect the channel geometry in snapshots, where recent methods are not able to find this channel. In addition, the method yields information about channel parameters which vary over time. We can evaluate opening and closing of the input channel.
  • In this paper we present a new approach to the processing of molecule dynamics. The method performs the tracking of a channel in a sequence of molecule snapshots which represent atom positions in the molecule in certain time intervals. The centerline of the tracked channel is refined using the Delaunay triangulation from the actual snapshot resulting in a new optimized centerline. This method allows us easily to animate the behaviour of the channel in the sequence. The method can also be used to detect the channel geometry in snapshots, where recent methods are not able to find this channel. In addition, the method yields information about channel parameters which vary over time. We can evaluate opening and closing of the input channel. (en)
Title
  • Tracking single channel in protein dynamics
  • Tracking single channel in protein dynamics (en)
skos:prefLabel
  • Tracking single channel in protein dynamics
  • Tracking single channel in protein dynamics (en)
skos:notation
  • RIV/00216224:14330/10:00043248!RIV11-GA0-14330___
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(GA201/07/0927), P(LC06008)
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 293200
http://linked.open...ai/riv/idVysledku
  • RIV/00216224:14330/10:00043248
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • channel; protein dynamics; tracking; Voronoi diagram; Delaunay triangulation (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...ontrolniKodProRIV
  • [2D1569343BDE]
http://linked.open...v/mistoKonaniAkce
  • Plzeň
http://linked.open...i/riv/mistoVydani
  • Plzeň
http://linked.open...i/riv/nazevZdroje
  • WSCG Communication Papers proceedings
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...iv/tvurceVysledku
  • Beneš, Petr
  • Medek, Petr
  • Sochor, Jiří
http://linked.open...vavai/riv/typAkce
http://linked.open.../riv/zahajeniAkce
number of pages
http://purl.org/ne...btex#hasPublisher
  • Západočeská univerzita v Plzni
https://schema.org/isbn
  • 978-80-86943-87-9
http://localhost/t...ganizacniJednotka
  • 14330
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