About: Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	E. coli strains (n = 1670) isolated during years 2007-2010 in the Czech Republic were collected from patients attending regional hospitals in Brno. All strains were tested using commercially available biochemical tests (ENTEROtest 16; Erba Lachema, Ltd., Brno, Czech Republic) for their biochemical activities, and with PCR for the presence to one out of four E. coli phylogroups including group A, B1, B2, and D. Moreover, the incidence of 29 bacteriocin-encoding determinants (i.e. colicin and microcin encoding genes) was tested in each individual E. coli strain. According to their biochemical activity, 1670 E. coli strains clustered into 6 groups containing 709, 50, 47, 744, 103, and 17 strains, respectively. The two largest clusters differed in the incidence of both phylogroups B2 and D and also in the incidence of bacteriocin determinants of mH47, mM, E1 and K. In addition, the incidence of colicinogenic strains was higher in the phylogroup A and B1 (p < 0. E. coli strains (n = 1670) isolated during years 2007-2010 in the Czech Republic were collected from patients attending regional hospitals in Brno. All strains were tested using commercially available biochemical tests (ENTEROtest 16; Erba Lachema, Ltd., Brno, Czech Republic) for their biochemical activities, and with PCR for the presence to one out of four E. coli phylogroups including group A, B1, B2, and D. Moreover, the incidence of 29 bacteriocin-encoding determinants (i.e. colicin and microcin encoding genes) was tested in each individual E. coli strain. According to their biochemical activity, 1670 E. coli strains clustered into 6 groups containing 709, 50, 47, 744, 103, and 17 strains, respectively. The two largest clusters differed in the incidence of both phylogroups B2 and D and also in the incidence of bacteriocin determinants of mH47, mM, E1 and K. In addition, the incidence of colicinogenic strains was higher in the phylogroup A and B1 (p < 0. (en)
Title	Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains (en)
skos:prefLabel	Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains Bacteriocin genes among E. coli strains: the incidence depends on genotype and phenotype of E. coli strains (en)
skos:notation	RIV/00216224:14110/11:00050393!RIV12-MZ0-14110___
http://linked.open...avai/predkladatel	Lékařská fakulta
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GA310/07/0321), P(NT11159), Z(MSM0021622415)
http://linked.open...vai/riv/dodaniDat	2012
http://linked.open...aciTvurceVysledku	Štaudová, Barbora Woznicová, Vladana Micenková, Lenka Šmajs, David Šmarda, Jan
http://linked.open.../riv/druhVysledku	O - Ostatní výsledky nezařaditelné do žádného z výše uvedených druhů výsledku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Lékařská fakulta
http://linked.open...dnocenehoVysledku	187751
http://linked.open...ai/riv/idVysledku	RIV/00216224:14110/11:00050393
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	E. coli; bacteriocin; colicin; microcin; phylogroup (en)
http://linked.open.../riv/klicoveSlovo	bacteriocin colicin microcin phylogroup E. coli
http://linked.open...ontrolniKodProRIV	[3C86CE286E0A]
http://linked.open...in/vavai/riv/obor	EE
http://linked.open...ichTvurcuVysledku	5 (xsd:int)
http://linked.open...cetTvurcuVysledku	8 (xsd:int)
http://linked.open...vavai/riv/projekt	Molecular typing of syphilis-causing strains in the Czech Republic and detection of mutations leading to macrolide resistance Genomics of Treponema: comparative genome sequencing of pathogenic treponemes and transcriptome analysis of T. pallidum ssp. pallidum
http://linked.open...UplatneniVysledku	2011
http://linked.open...iv/tvurceVysledku	Micenková, Lenka Vališová, Zuzana Vrba, Martin Woznicová, Vladana Šmarda, Jan Šmajs, David Ševčíková, Alena Štaudová, Barbora
http://linked.open...n/vavai/riv/zamer	Molecular basis of cell and tissue regulations
http://localhost/t...ganizacniJednotka	14110

Faceted Search & Find service v1.16.118 as of Jun 21 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 58 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software