. . "47-47" . "559927" . "B\u00E1rtov\u00E1, Iveta" . "Detailed knowledge of interactions inside the proteins plays an important role in drug design. Experimental methods such as X-crystallography, NMR spectroscopy and neutron diffraction are typical experimental methods to analyze these interactions at atomic level [1]. These experimental methods can, in some cases, be complemented by molecular modeling methods. The molecular docking combined with flexible conformational search, molecular dynamics and quantum dynamics are the most used modeling methods at this time. Recently, the interactions of solvent molecules with cyclin dependent kinase (CDK2) using molecular dynamics were studied in our laboratory [2]. The study was extended to molecular dynamics with mixtured solvent (water molecules mixtured with small organic molecules) and also to utilization of systematic molecular docking of small organic molecules into CDK2 using CICADA [3, 4] program. The results of such calculations will be used. As a mixtured solvent water + dimethylether and water"@en . "2004-03-11+01:00"^^ . "Z(MSM 143100005)" . . . "Nov\u00E9 Hrady" . . . "Materials in Structure Chemistry, Biology, Physics and Technology" . "Otyepka, Michal" . . "RIV/00216224:14310/04:00009965" . "Molecular dynamics, molecular docking, solvation"@en . "Detailed study of interactions between small molecules and proteins using molecular modeling"@en . "[FF8B957B720B]" . "Praha" . "Ko\u010Da, Jaroslav" . . "RIV/00216224:14310/04:00009965!RIV/2005/MSM/143105/N" . . "Detailed study of interactions between small molecules and proteins using molecular modeling" . "4"^^ . . . "Detailed study of interactions between small molecules and proteins using molecular modeling"@cs . . "K\u0159\u00ED\u017E, Zden\u011Bk" . . . . "Detailed study of interactions between small molecules and proteins using molecular modeling"@cs . "14310" . "1211-5894" . "3"^^ . . "1"^^ . . . "Detailed knowledge of interactions inside the proteins plays an important role in drug design. Experimental methods such as X-crystallography, NMR spectroscopy and neutron diffraction are typical experimental methods to analyze these interactions at atomic level [1]. These experimental methods can, in some cases, be complemented by molecular modeling methods. The molecular docking combined with flexible conformational search, molecular dynamics and quantum dynamics are the most used modeling methods at this time. Recently, the interactions of solvent molecules with cyclin dependent kinase (CDK2) using molecular dynamics were studied in our laboratory [2]. The study was extended to molecular dynamics with mixtured solvent (water molecules mixtured with small organic molecules) and also to utilization of systematic molecular docking of small organic molecules into CDK2 using CICADA [3, 4] program. The results of such calculations will be used. As a mixtured solvent water + dimethylether and water" . "Detailed study of interactions between small molecules and proteins using molecular modeling"@en . "Detailed knowledge of interactions inside the proteins plays an important role in drug design. Experimental methods such as X-crystallography, NMR spectroscopy and neutron diffraction are typical experimental methods to analyze these interactions at atomic level [1]. These experimental methods can, in some cases, be complemented by molecular modeling methods. The molecular docking combined with flexible conformational search, molecular dynamics and quantum dynamics are the most used modeling methods at this time. Recently, the interactions of solvent molecules with cyclin dependent kinase (CDK2) using molecular dynamics were studied in our laboratory [2]. The study was extended to molecular dynamics with mixtured solvent (water molecules mixtured with small organic molecules) and also to utilization of systematic molecular docking of small organic molecules into CDK2 using CICADA [3, 4] program. The results of such calculations will be used. As a mixtured solvent water + dimethylether and water"@cs . "Krystalografick\u00E1 spole\u010Dnost" . "Detailed study of interactions between small molecules and proteins using molecular modeling" .