. "2014-01-30+01:00"^^ . "11"^^ . . " FISH" . . " Equids" . "2012-12-31+01:00"^^ . . "0"^^ . . "Immunity-related; genes; MHC; KIR/Ly49; SNP; FISH; horse; Equids; evolution"@en . "Podrobn\u00E9 mapov\u00E1n\u00ED imunogenomu \u010Deledi Equidae, z\u00E1rove\u0148 s celogenomov\u00FDm srovn\u00E1vac\u00EDm mapov\u00E1n\u00EDm n\u011Bkter\u00FDch subchromosom\u00E1ln\u00EDch p\u0159estaveb. Asociace mezi polymorfn\u00EDmi markery vybran\u00FDch gen\u016F imunitn\u00ED odpov\u011Bdi a n\u011Bkter\u00FDch protozoarn\u00EDch parazit\u016F. Tak\u00E9 byly vytvo\u0159eny diagnostick\u00E9 testy pro detekci t\u011Bchto parazit\u016F. Celkem bylo publikov\u00E1no 5 \u010Dl\u00E1nk\u016F v \u010Dasopisech s pr\u016Fm\u011Brn\u00FDm impaktem v r\u00E1mci oboru."@cs . "Comparative analysis of the immunogenome of the family Equidae in the context of host-pathogen interactions will be performed. Allelic sequence diversity, evolution and balancing selection of the MHC DRB, DQB genes and of the KIR/Ly49 genes, encoding natural killer cell receptors will be analyzed in zebras, asses and donkeys. Furthermore, comparative analysis of single nucleotide polymorphisms (SNPs) in selected immunity-related genes will be performed in various species of zebras, asses and in two populations of domestic donkeys. Genes showing across-breed associations with virus (West Nile virus), bacterial (Rhodococcus equi) and protozoan (Trypanosoma evansi) infections will be selected for analysis. Horse-specific primers will be used for amplifying the corresponding orthologues in other equid species. The PCR products will be cloned and sequenced. SNPs identified will be used for evaluating the extent of genetic diversity and evolutionary relationships of various Equids. Chromosome evolution of Equidae with special focus on chromosome microrearrangements will be investigated."@en . . "1"^^ . . "2"^^ . "2012-03-30+02:00"^^ . . . . . . . . "Immunity-related" . " horse" . . "Comparative immunogenomics of the family Equidae"@en . "2009-01-01+01:00"^^ . . . . "http://www.isvav.cz/projectDetail.do?rowId=GA523/09/1972"^^ . . " genes" . "Komparativn\u00ED imunogenomika \u010Deledi Equidae" . . "GA523/09/1972" . "C\u00EDlem projektu je srovn\u00E1vac\u00ED anal\u00FDza imunogenomu \u010Deledi Equidae v kontextu interakc\u00ED hostitele a patogena. Na z\u00E1klad\u011B ur\u010Den\u00ED sekven\u010Dn\u00ED alelick\u00E9 diversity gen\u016F MHC DRB a DQB a dvou rodin gen\u016F k\u00F3duj\u00EDc\u00EDch receptory NK bun\u011Bk KIR/Ly49 bude provedena evolu\u010Dn\u00ED anal\u00FDza u r\u016Fzn\u00FDch druh\u016F zeber, velk\u00FDch osl\u016F a dom\u00E1c\u00EDch osl\u016F z It\u00E1lie a Keni, d\u00E1le bude zkoum\u00E1n vliv balancovan\u00E9 selekce na specifick\u00E1 aminokyselinov\u00E1 m\u00EDsta. Polymorfismus gen\u016F imunitn\u00ED odpov\u011Bdi, kter\u00E9 jsou nejm\u00E9n\u011B u dvou plemen kon\u00ED asociov\u00E1ny s resistenc\u00ED k virov\u00E9 (virus z\u00E1padonilsk\u00E9 hore\u010Dky), bakteri\u00E1ln\u00ED (Rhodococcus equi) a protozo\u00E1rn\u00ED (Trypanosoma evansi) infekci bude analyzov\u00E1n za vyu\u017Eit\u00ED ko\u0148sk\u00FDch primer\u016F u r\u016Fzn\u00FDch p\u0159\u00EDslu\u0161n\u00EDk\u016F \u010Deledi Equidae. PCR produkty budou klonov\u00E1ny, sekvenov\u00E1ny a budou v nich identifikov\u00E1ny jednonukleotidov\u00E9 polymorfismy (SNP). Data budou vyu\u017Eita pro ur\u010Den\u00ED stupn\u011B genetick\u00E9 diversity\u00A0 r\u016Fzn\u00FDch populac\u00ED a pro ur\u010Den\u00ED evolu\u010Dn\u00EDch vztah\u016F mezi druhy. Evoluce chromosom\u016F se zvl\u00E1\u0161tn\u00EDm z\u0159etelem na mikrop\u0159estavby p\u0159i speciaci bude zkoum\u00E1na za vyu\u017Eit\u00ED metod molekul\u00E1rn\u00ED cytogenetiky." . " KIR/Ly49" . "Detailed mapping of the immunogenome of the family Equidae, as well as genome wide comparative maps of some subchromosomal rearangements. Association between polymorphic markers of selected immune genes and some protozoan parasites. Diagnostic assays for these parasites were also developed. Altogether 5 papers have been published in journals with an average impact within the particular branch."@en . " SNP" . "11"^^ . " MHC" .