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Statements

Subject Item
n2:RIV%2F68081766%3A_____%2F11%3A00351529%21RIV12-AV0-68081766
rdf:type
skos:Concept n8:Vysledek
dcterms:description
We present 151 SNPs (single nucleotide polymorphisms) identified in Tatra and Alpine chamois individuals after genotyping with the Bovine SNP50 Genotyping BeadChip (Illumina). Population structure analysis based on the identified 151 SNPs as well as a subset of 48 SNPs were able to give information about geographic origin of each individual making the markers suitable for future evaluation and monitoring of the genetic status of the Tatra and Alpine chamois. Our study demonstrates how it is possible to quickly identify informative SNPs in non-model organisms based on a SNP marker panel created for a related domestic species. We present 151 SNPs (single nucleotide polymorphisms) identified in Tatra and Alpine chamois individuals after genotyping with the Bovine SNP50 Genotyping BeadChip (Illumina). Population structure analysis based on the identified 151 SNPs as well as a subset of 48 SNPs were able to give information about geographic origin of each individual making the markers suitable for future evaluation and monitoring of the genetic status of the Tatra and Alpine chamois. Our study demonstrates how it is possible to quickly identify informative SNPs in non-model organisms based on a SNP marker panel created for a related domestic species.
dcterms:title
Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra) Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra)
skos:prefLabel
Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra) Characterization of 151 SNPs for population structure analysis of the endangered Tatra chamois (Rupicapra rupicapra tatrica) and its relative, the Alpine chamois (R. r. rupicapra)
skos:notation
RIV/68081766:_____/11:00351529!RIV12-AV0-68081766
n8:predkladatel
n9:ico%3A68081766
n3:aktivita
n13:Z n13:P
n3:aktivity
P(IAA600930609), Z(AV0Z60930519)
n3:cisloPeriodika
5
n3:dodaniDat
n19:2012
n3:domaciTvurceVysledku
n6:5425018 n6:1659758 n6:3184374
n3:druhVysledku
n14:J
n3:duvernostUdaju
n12:S
n3:entitaPredkladatele
n17:predkladatel
n3:idSjednocenehoVysledku
190015
n3:idVysledku
RIV/68081766:_____/11:00351529
n3:jazykVysledku
n20:eng
n3:klicovaSlova
SNP chip; non-model species; Tatra chamois; Alpine chamois; hybridization
n3:klicoveSlovo
n4:hybridization n4:non-model%20species n4:Tatra%20chamois n4:SNP%20chip n4:Alpine%20chamois
n3:kodStatuVydavatele
DE - Spolková republika Německo
n3:kontrolniKodProRIV
[CCB583B0AB1D]
n3:nazevZdroje
Mammalian Biology
n3:obor
n10:EG
n3:pocetDomacichTvurcuVysledku
3
n3:pocetTvurcuVysledku
7
n3:projekt
n15:IAA600930609
n3:rokUplatneniVysledku
n19:2011
n3:svazekPeriodika
76
n3:tvurceVysledku
Czarnomska, S. D. Loeschcke, V. Pertoldi, C. Demontis, D. Hájková, Petra Zemanová, Barbora Bryja, Josef
n3:wos
000295440100017
n3:zamer
n18:AV0Z60930519
s:issn
1616-5047
s:numberOfPages
2
n16:doi
10.1016/j.mambio.2010.10.004