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Statements

Subject Item
n2:RIV%2F62156489%3A43210%2F13%3A00203264%21RIV14-MSM-43210___
rdf:type
n7:Vysledek skos:Concept
dcterms:description
The coat protein (CP) gene DNA sequences of nine isolates of Hosta virus X (HVX) from different regions of the Czech Republic were determined and compared with sequences available in GenBank. The sequences were almost uniform, the pairwise nucleotide identities among the Czech HVX isolates were from 99 to 100%. The respective range was from 98 to 100% when sequences from the GenBank were included. Therefore, phylogenetic analyses including Maximum parsimony and Bayesian analyses of either, DNA and deduced amino acid sequences, showed close relationship among isolates. Only the group of two isolates, HVXCR1 and HVXCR8 showed significant sequence divergence in phylogenetic trees. The HVXCR1-HVXCR8 group differs from the others by the substitution of glutamine (Q) by arginine (R). Moreover, these isolates showed different symptoms on infected hosta leaves: deformation on the leaves without a mosaic or mottling. This amino acid change may, therefore, have a biological significance. The coat protein (CP) gene DNA sequences of nine isolates of Hosta virus X (HVX) from different regions of the Czech Republic were determined and compared with sequences available in GenBank. The sequences were almost uniform, the pairwise nucleotide identities among the Czech HVX isolates were from 99 to 100%. The respective range was from 98 to 100% when sequences from the GenBank were included. Therefore, phylogenetic analyses including Maximum parsimony and Bayesian analyses of either, DNA and deduced amino acid sequences, showed close relationship among isolates. Only the group of two isolates, HVXCR1 and HVXCR8 showed significant sequence divergence in phylogenetic trees. The HVXCR1-HVXCR8 group differs from the others by the substitution of glutamine (Q) by arginine (R). Moreover, these isolates showed different symptoms on infected hosta leaves: deformation on the leaves without a mosaic or mottling. This amino acid change may, therefore, have a biological significance.
dcterms:title
The variability of Hosta Virus X isolates in the Czech Republic The variability of Hosta Virus X isolates in the Czech Republic
skos:prefLabel
The variability of Hosta Virus X isolates in the Czech Republic The variability of Hosta Virus X isolates in the Czech Republic
skos:notation
RIV/62156489:43210/13:00203264!RIV14-MSM-43210___
n7:predkladatel
n8:orjk%3A43210
n3:aktivita
n12:S
n3:aktivity
S
n3:cisloPeriodika
3
n3:dodaniDat
n10:2014
n3:domaciTvurceVysledku
n4:8540128 n4:4761790 n4:7264445 n4:9332162
n3:druhVysledku
n6:J
n3:duvernostUdaju
n16:S
n3:entitaPredkladatele
n14:predkladatel
n3:idSjednocenehoVysledku
113627
n3:idVysledku
RIV/62156489:43210/13:00203264
n3:jazykVysledku
n18:eng
n3:klicovaSlova
Hosta virus X; coat protein; phylogenetic analysis
n3:klicoveSlovo
n11:Hosta%20virus%20X n11:coat%20protein n11:phylogenetic%20analysis
n3:kodStatuVydavatele
SK - Slovenská republika
n3:kontrolniKodProRIV
[BA6B11EAD83B]
n3:nazevZdroje
Acta Virologica
n3:obor
n9:GF
n3:pocetDomacichTvurcuVysledku
4
n3:pocetTvurcuVysledku
4
n3:rokUplatneniVysledku
n10:2013
n3:svazekPeriodika
57
n3:tvurceVysledku
Šafránková, Ivana Holková, Ludmila Tomšovský, Michal Koláčková, Anna
n3:wos
325040600010
s:issn
0001-723X
s:numberOfPages
5
n13:organizacniJednotka
43210