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Statements

Subject Item
n2:RIV%2F61989592%3A15310%2F14%3A33152035%21RIV15-MSM-15310___
rdf:type
skos:Concept n9:Vysledek
rdfs:seeAlso
http://www.sciencedirect.com/science/article/pii/S1055790314001973
dcterms:description
The phylogenetic relationships of the beetle superfamily Tenebrionoidea are investigated using the most comprehensive genetic data set compiled to date. With 34,000 described species in approximately 1250 genera and 28 families, Tenebrionoidea represent one of the most diverse and species-rich superfamilies of beetles. The interfamilial relationships of the Tenebrionoidea are poorly known; previous morphological and molecular phylogenies recovered few well-supported and often conflicting relationships between families. Here we present a molecular phylogeny of Tenebrionoidea based on genes commonly used to resolve family and superfamily-level phylogenies of beetles (18S, 28S, 16S, 12S, tRNA Val and COI). The alignment spanned over 6.5 KB of DNA sequence and over 300 tenebrionoid genera from 24 of the 28 families were sampled. Maximum Likelihood and Bayesian analysis could not resolve deeper level divergences within the superfamily and very few relationships between families were supported. Increasing gene coverage in the alignment by removing taxa with missing data did not improve clade support but when rogue taxa were removed increased resolution was recovered. Investigation of signal strength suggested conflicting phylogenetic signal was present in the standard genes used for beetle phylogenetics, even when rogue taxa were removed. Our study of Tenebrionoidea highlights that even with relatively comprehensive taxon sampling within a lineage, this standard set of genes is unable to resolve relationships within this superfamily The phylogenetic relationships of the beetle superfamily Tenebrionoidea are investigated using the most comprehensive genetic data set compiled to date. With 34,000 described species in approximately 1250 genera and 28 families, Tenebrionoidea represent one of the most diverse and species-rich superfamilies of beetles. The interfamilial relationships of the Tenebrionoidea are poorly known; previous morphological and molecular phylogenies recovered few well-supported and often conflicting relationships between families. Here we present a molecular phylogeny of Tenebrionoidea based on genes commonly used to resolve family and superfamily-level phylogenies of beetles (18S, 28S, 16S, 12S, tRNA Val and COI). The alignment spanned over 6.5 KB of DNA sequence and over 300 tenebrionoid genera from 24 of the 28 families were sampled. Maximum Likelihood and Bayesian analysis could not resolve deeper level divergences within the superfamily and very few relationships between families were supported. Increasing gene coverage in the alignment by removing taxa with missing data did not improve clade support but when rogue taxa were removed increased resolution was recovered. Investigation of signal strength suggested conflicting phylogenetic signal was present in the standard genes used for beetle phylogenetics, even when rogue taxa were removed. Our study of Tenebrionoidea highlights that even with relatively comprehensive taxon sampling within a lineage, this standard set of genes is unable to resolve relationships within this superfamily
dcterms:title
Towards a phylogeny of the Tenebrionoidea (Coleoptera) Towards a phylogeny of the Tenebrionoidea (Coleoptera)
skos:prefLabel
Towards a phylogeny of the Tenebrionoidea (Coleoptera) Towards a phylogeny of the Tenebrionoidea (Coleoptera)
skos:notation
RIV/61989592:15310/14:33152035!RIV15-MSM-15310___
n3:aktivita
n17:P
n3:aktivity
P(EE2.3.30.0004), P(GAP506/11/1757)
n3:cisloPeriodika
79
n3:dodaniDat
n15:2015
n3:domaciTvurceVysledku
n14:6419941 n14:4083806
n3:druhVysledku
n16:J
n3:duvernostUdaju
n19:S
n3:entitaPredkladatele
n4:predkladatel
n3:idSjednocenehoVysledku
50798
n3:idVysledku
RIV/61989592:15310/14:33152035
n3:jazykVysledku
n13:eng
n3:klicovaSlova
Signal strength; Rogue taxa; Lymexyloidea; Anthicidae; Zopheridae; Tenebrionidae
n3:klicoveSlovo
n8:Anthicidae n8:Zopheridae n8:Signal%20strength n8:Lymexyloidea n8:Tenebrionidae n8:Rogue%20taxa
n3:kodStatuVydavatele
GB - Spojené království Velké Británie a Severního Irska
n3:kontrolniKodProRIV
[284CDBBA5907]
n3:nazevZdroje
Molecular Phylogenetics and Evolution
n3:obor
n20:EG
n3:pocetDomacichTvurcuVysledku
2
n3:pocetTvurcuVysledku
6
n3:projekt
n12:EE2.3.30.0004 n12:GAP506%2F11%2F1757
n3:rokUplatneniVysledku
n15:2014
n3:svazekPeriodika
79
n3:tvurceVysledku
Levkaničová, Zuzana Bocák, Ladislav Gunter, Nicole Weir, Tom
n3:wos
000342884800023
s:issn
1055-7903
s:numberOfPages
8
n11:doi
10.1016/j.ympev.2014.05.028
n18:organizacniJednotka
15310