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Statements

Subject Item
n2:RIV%2F61389030%3A_____%2F11%3A00374549%21RIV12-AV0-61389030
rdf:type
n11:Vysledek skos:Concept
dcterms:description
To improve our understanding of the organization and regulation of the wheat (Triticum aestivum) gene space, we established a transcription map of a wheat chromosome (3B) by hybridizing a newly developed wheat expression microarray with bacterial artificial chromosome pools from a new version of the 3B physical map as well as with cDNA probes derived from 15 RNA samples. Mapping data for almost 3,000 genes showed that the gene space spans the whole chromosome 3B with a 2-fold increase of gene density toward the telomeres due to an increase in the number of genes in islands. Comparative analyses with rice (Oryza sativa) and Brachypodium distachyon revealed that these gene islands are composed mainly of genes likely originating from interchromosomal gene duplications. Gene Ontology and expression profile analyses for the 3,000 genes located along the chromosome revealed that the gene islands are enriched significantly in genes sharing the same function or expression profile. To improve our understanding of the organization and regulation of the wheat (Triticum aestivum) gene space, we established a transcription map of a wheat chromosome (3B) by hybridizing a newly developed wheat expression microarray with bacterial artificial chromosome pools from a new version of the 3B physical map as well as with cDNA probes derived from 15 RNA samples. Mapping data for almost 3,000 genes showed that the gene space spans the whole chromosome 3B with a 2-fold increase of gene density toward the telomeres due to an increase in the number of genes in islands. Comparative analyses with rice (Oryza sativa) and Brachypodium distachyon revealed that these gene islands are composed mainly of genes likely originating from interchromosomal gene duplications. Gene Ontology and expression profile analyses for the 3,000 genes located along the chromosome revealed that the gene islands are enriched significantly in genes sharing the same function or expression profile.
dcterms:title
A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
skos:prefLabel
A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat A 3,000-Loci Transcription Map of Chromosome 3B Unravels the Structural and Functional Features of Gene Islands in Hexaploid Wheat
skos:notation
RIV/61389030:_____/11:00374549!RIV12-AV0-61389030
n11:predkladatel
n15:ico%3A61389030
n3:aktivita
n12:P n12:Z
n3:aktivity
P(ED0007/01/01), Z(AV0Z50380511)
n3:cisloPeriodika
4
n3:dodaniDat
n13:2012
n3:domaciTvurceVysledku
n4:1800477 n4:5207010 n4:3817016
n3:druhVysledku
n6:J
n3:duvernostUdaju
n14:S
n3:entitaPredkladatele
n18:predkladatel
n3:idSjednocenehoVysledku
184267
n3:idVysledku
RIV/61389030:_____/11:00374549
n3:jazykVysledku
n19:eng
n3:klicovaSlova
LOCAL COEXPRESSION DOMAINS; ARABIDOPSIS-THALIANA; NEIGHBORING GENES
n3:klicoveSlovo
n8:ARABIDOPSIS-THALIANA n8:NEIGHBORING%20GENES n8:LOCAL%20COEXPRESSION%20DOMAINS
n3:kodStatuVydavatele
US - Spojené státy americké
n3:kontrolniKodProRIV
[9F9887CD9E39]
n3:nazevZdroje
Plant Physiology
n3:obor
n20:EB
n3:pocetDomacichTvurcuVysledku
3
n3:pocetTvurcuVysledku
14
n3:projekt
n16:ED0007%2F01%2F01
n3:rokUplatneniVysledku
n13:2011
n3:svazekPeriodika
157
n3:tvurceVysledku
Doležel, Jaroslav Berges, H. Šafář, Jan Choulet, F. Laugier, Ch. Magni, F. Feuillet, C. Cattonaro, F. Bellec, A. Paux, E. Rustenholz, C. Šimková, Hana Vautrin, S. Scalabrin, S.
n3:wos
000298375600002
n3:zamer
n7:AV0Z50380511
s:issn
0032-0889
s:numberOfPages
13
n5:doi
10.1104/pp.111.183921