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Statements

Subject Item
n2:RIV%2F61389030%3A_____%2F11%3A00365266%21RIV12-AV0-61389030
rdf:type
n16:Vysledek skos:Concept
dcterms:description
All six arms of the group 1 chromosomes of hexaploid wheat (Triticum aestivum) were sequenced with Roche/454 to 1.3- to 2.2-fold coverage and compared with similar data sets from the homoeologous chromosome 1H of barley (Hordeum vulgare). Six to ten thousand gene sequences were sampled per chromosome. These were classified into genes that have their closest homologs in the Triticeae group 1 syntenic region in Brachypodium, rice (Oryza sativa), and/or sorghum (Sorghum bicolor) and genes that have their homologs elsewhere in these model grass genomes. Although the number of syntenic genes was similar between the homologous groups, the amount of nonsyntenic genes was found to be extremely diverse between wheat and barley and even between wheat subgenomes. Besides a small core group of genes that are nonsyntenic in other grasses but conserved among Triticeae, we found thousands of genic sequences that are specific to chromosomes of one single species or subgenome. All six arms of the group 1 chromosomes of hexaploid wheat (Triticum aestivum) were sequenced with Roche/454 to 1.3- to 2.2-fold coverage and compared with similar data sets from the homoeologous chromosome 1H of barley (Hordeum vulgare). Six to ten thousand gene sequences were sampled per chromosome. These were classified into genes that have their closest homologs in the Triticeae group 1 syntenic region in Brachypodium, rice (Oryza sativa), and/or sorghum (Sorghum bicolor) and genes that have their homologs elsewhere in these model grass genomes. Although the number of syntenic genes was similar between the homologous groups, the amount of nonsyntenic genes was found to be extremely diverse between wheat and barley and even between wheat subgenomes. Besides a small core group of genes that are nonsyntenic in other grasses but conserved among Triticeae, we found thousands of genic sequences that are specific to chromosomes of one single species or subgenome.
dcterms:title
Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives
skos:prefLabel
Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives
skos:notation
RIV/61389030:_____/11:00365266!RIV12-AV0-61389030
n16:predkladatel
n18:ico%3A61389030
n4:aktivita
n17:Z n17:P
n4:aktivity
P(LC06004), P(OC08025), Z(AV0Z50380511)
n4:cisloPeriodika
5
n4:dodaniDat
n11:2012
n4:domaciTvurceVysledku
n5:5207010 n5:5256593 n5:1800477
n4:druhVysledku
n20:J
n4:duvernostUdaju
n15:S
n4:entitaPredkladatele
n9:predkladatel
n4:idSjednocenehoVysledku
200400
n4:idVysledku
RIV/61389030:_____/11:00365266
n4:jazykVysledku
n7:eng
n4:klicovaSlova
TRITICUM-AESTIVUM L.; NUCLEAR-DNA CONTENT; HIGH-THROUGHPUT
n4:klicoveSlovo
n10:TRITICUM-AESTIVUM%20L. n10:HIGH-THROUGHPUT n10:NUCLEAR-DNA%20CONTENT
n4:kodStatuVydavatele
US - Spojené státy americké
n4:kontrolniKodProRIV
[C05AA8C3DD89]
n4:nazevZdroje
Plant Cell
n4:obor
n13:EB
n4:pocetDomacichTvurcuVysledku
3
n4:pocetTvurcuVysledku
17
n4:projekt
n6:OC08025 n6:LC06004
n4:rokUplatneniVysledku
n11:2011
n4:svazekPeriodika
23
n4:tvurceVysledku
Stein, N. Wicker, T. Šimková, Hana Mayer, K. F. X. Doležel, Jaroslav Kubaláková, Marie Choulet, F.
n4:wos
000292079800005
n4:zamer
n12:AV0Z50380511
s:issn
1040-4651
s:numberOfPages
13
n19:doi
10.1105/tpc.111.086629