This HTML5 document contains 41 embedded RDF statements represented using HTML+Microdata notation.

The embedded RDF content will be recognized by any processor of HTML5 Microdata.

Namespace Prefixes

PrefixIRI
n12http://linked.opendata.cz/resource/domain/vavai/vysledek/RIV%2F61388963%3A_____%2F14%3A00435027%21RIV15-AV0-61388963/
dctermshttp://purl.org/dc/terms/
n4http://linked.opendata.cz/ontology/domain/vavai/
shttp://schema.org/
skoshttp://www.w3.org/2004/02/skos/core#
n3http://linked.opendata.cz/ontology/domain/vavai/riv/
n15http://bibframe.org/vocab/
n2http://linked.opendata.cz/resource/domain/vavai/vysledek/
rdfhttp://www.w3.org/1999/02/22-rdf-syntax-ns#
n5http://linked.opendata.cz/ontology/domain/vavai/riv/klicoveSlovo/
n16http://linked.opendata.cz/ontology/domain/vavai/riv/duvernostUdaju/
xsdhhttp://www.w3.org/2001/XMLSchema#
n14http://linked.opendata.cz/ontology/domain/vavai/riv/aktivita/
n11http://linked.opendata.cz/ontology/domain/vavai/riv/jazykVysledku/
n13http://linked.opendata.cz/ontology/domain/vavai/riv/druhVysledku/
n7http://linked.opendata.cz/ontology/domain/vavai/riv/obor/
n8http://reference.data.gov.uk/id/gregorian-year/

Statements

Subject Item
n2:RIV%2F61388963%3A_____%2F14%3A00435027%21RIV15-AV0-61388963
rdf:type
n4:Vysledek skos:Concept
dcterms:description
Frequency-resolved communication maps provide a coarse-grained, global mapping of energy transport channels in a protein as a function of frequency of modes that carry energy. We illustrate the approach with a study of the homodimeric hemoglobin of Scapharca inaequivalvis, which exhibits cooperativity during ligand binding. We compare energy transport between the two hemes of the unliganded and oxygenated protein, which is mediated by water as well as residues forming a hydrogen-bonding network at the interface between the globules, and lies along the pathway for allosteric transitions observed in time-resolved X-ray studies. Non-equilibrium molecular simulations on energy transport from the heme corroborate the energy transport pathways identified by the communication maps. Frequency-resolved communication maps provide a coarse-grained, global mapping of energy transport channels in a protein as a function of frequency of modes that carry energy. We illustrate the approach with a study of the homodimeric hemoglobin of Scapharca inaequivalvis, which exhibits cooperativity during ligand binding. We compare energy transport between the two hemes of the unliganded and oxygenated protein, which is mediated by water as well as residues forming a hydrogen-bonding network at the interface between the globules, and lies along the pathway for allosteric transitions observed in time-resolved X-ray studies. Non-equilibrium molecular simulations on energy transport from the heme corroborate the energy transport pathways identified by the communication maps.
dcterms:title
Communication Maps: Exploring Energy Transport through Proteins and Water Communication Maps: Exploring Energy Transport through Proteins and Water
skos:prefLabel
Communication Maps: Exploring Energy Transport through Proteins and Water Communication Maps: Exploring Energy Transport through Proteins and Water
skos:notation
RIV/61388963:_____/14:00435027!RIV15-AV0-61388963
n3:aktivita
n14:I
n3:aktivity
I
n3:cisloPeriodika
8/9
n3:dodaniDat
n8:2015
n3:domaciTvurceVysledku
Gnanasekaran, Ramachandran
n3:druhVysledku
n13:J
n3:duvernostUdaju
n16:S
n3:entitaPredkladatele
n12:predkladatel
n3:idSjednocenehoVysledku
7879
n3:idVysledku
RIV/61388963:_____/14:00435027
n3:jazykVysledku
n11:eng
n3:klicovaSlova
energy transfer; heme proteins; hydrogen bonds; molecular modeling; protein models
n3:klicoveSlovo
n5:energy%20transfer n5:hydrogen%20bonds n5:molecular%20modeling n5:heme%20proteins n5:protein%20models
n3:kodStatuVydavatele
IL - Stát Izrael
n3:kontrolniKodProRIV
[F148597D8E8B]
n3:nazevZdroje
Israel Journal of Chemistry
n3:obor
n7:CF
n3:pocetDomacichTvurcuVysledku
1
n3:pocetTvurcuVysledku
3
n3:rokUplatneniVysledku
n8:2014
n3:svazekPeriodika
54
n3:tvurceVysledku
Gnanasekaran, Ramachandran Agbo, J. K. Leitner, D. M.
n3:wos
000342796500004
s:issn
0021-2148
s:numberOfPages
9
n15:doi
10.1002/ijch.201300139