This HTML5 document contains 53 embedded RDF statements represented using HTML+Microdata notation.

The embedded RDF content will be recognized by any processor of HTML5 Microdata.

Namespace Prefixes

PrefixIRI
dctermshttp://purl.org/dc/terms/
n16http://linked.opendata.cz/resource/domain/vavai/riv/tvurce/
n8http://linked.opendata.cz/resource/domain/vavai/projekt/
n14http://linked.opendata.cz/resource/domain/vavai/subjekt/
n12http://linked.opendata.cz/resource/domain/vavai/vysledek/RIV%2F60077344%3A_____%2F13%3A00392318%21RIV14-AV0-60077344/
n13http://linked.opendata.cz/ontology/domain/vavai/
n4http://linked.opendata.cz/resource/domain/vavai/zamer/
shttp://schema.org/
skoshttp://www.w3.org/2004/02/skos/core#
n3http://linked.opendata.cz/ontology/domain/vavai/riv/
n18http://bibframe.org/vocab/
n2http://linked.opendata.cz/resource/domain/vavai/vysledek/
rdfhttp://www.w3.org/1999/02/22-rdf-syntax-ns#
n9http://linked.opendata.cz/ontology/domain/vavai/riv/klicoveSlovo/
n19http://linked.opendata.cz/ontology/domain/vavai/riv/duvernostUdaju/
xsdhhttp://www.w3.org/2001/XMLSchema#
n15http://linked.opendata.cz/ontology/domain/vavai/riv/jazykVysledku/
n7http://linked.opendata.cz/ontology/domain/vavai/riv/aktivita/
n20http://linked.opendata.cz/ontology/domain/vavai/riv/obor/
n11http://linked.opendata.cz/ontology/domain/vavai/riv/druhVysledku/
n17http://reference.data.gov.uk/id/gregorian-year/

Statements

Subject Item
n2:RIV%2F60077344%3A_____%2F13%3A00392318%21RIV14-AV0-60077344
rdf:type
skos:Concept n13:Vysledek
dcterms:description
Bacteria of the genus Limnohabitans, more precisely the R-BT lineage, have a prominent role in freshwater bacterioplankton communities due to their high rates of substrate uptake and growth, growth on algal-derived substrates and high mortality rates from bacterivory. Moreover, due to their generally larger mean cell volume, compared to typical bacterioplankton cells, they contribute over-proportionally to total bacterioplankton biomass. Here we present genetic, morphological and ecophysiological properties of 35 bacterial strains affiliated with the Limnohabitans genus newly isolated from 11 non-acidic European freshwater habitats. The low genetic diversity indicated by the previous studies using the ribosomal SSU gene highly contrasted with the surprisingly rich morphologies and different patterns in substrate utilization of isolated strains. Therefore, the intergenic spacer between 16S and 23S rRNA genes was successfully tested as a fine-scale marker to delineate individual lineages and even genotypes. For further studies, we propose the division of the Limnohabitans genus into five lineages (provisionally named as LimA, LimB, LimC, LimD and LimE) and also additional sublineages within the most diversified lineage LimC. Such a delineation is supported by the morphology of isolated strains which predetermine large differences in their ecology. Bacteria of the genus Limnohabitans, more precisely the R-BT lineage, have a prominent role in freshwater bacterioplankton communities due to their high rates of substrate uptake and growth, growth on algal-derived substrates and high mortality rates from bacterivory. Moreover, due to their generally larger mean cell volume, compared to typical bacterioplankton cells, they contribute over-proportionally to total bacterioplankton biomass. Here we present genetic, morphological and ecophysiological properties of 35 bacterial strains affiliated with the Limnohabitans genus newly isolated from 11 non-acidic European freshwater habitats. The low genetic diversity indicated by the previous studies using the ribosomal SSU gene highly contrasted with the surprisingly rich morphologies and different patterns in substrate utilization of isolated strains. Therefore, the intergenic spacer between 16S and 23S rRNA genes was successfully tested as a fine-scale marker to delineate individual lineages and even genotypes. For further studies, we propose the division of the Limnohabitans genus into five lineages (provisionally named as LimA, LimB, LimC, LimD and LimE) and also additional sublineages within the most diversified lineage LimC. Such a delineation is supported by the morphology of isolated strains which predetermine large differences in their ecology.
dcterms:title
The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains
skos:prefLabel
The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains The diversity of the Limnohabitans genus, an important group of freshwater bacterioplankton, by characterization of 35 isolated strains
skos:notation
RIV/60077344:_____/13:00392318!RIV14-AV0-60077344
n13:predkladatel
n14:ico%3A60077344
n3:aktivita
n7:V n7:Z n7:P n7:I
n3:aktivity
I, P(GA206/08/0015), P(GAP504/10/0566), P(MEB060702), P(MEB060901), V, Z(AV0Z60170517)
n3:cisloPeriodika
3
n3:dodaniDat
n17:2014
n3:domaciTvurceVysledku
n16:6252591 n16:2409135 n16:7194536
n3:druhVysledku
n11:J
n3:duvernostUdaju
n19:S
n3:entitaPredkladatele
n12:predkladatel
n3:idSjednocenehoVysledku
70063
n3:idVysledku
RIV/60077344:_____/13:00392318
n3:jazykVysledku
n15:eng
n3:klicovaSlova
bacterial microdiversity; aquatic; Limnohabitans; freshwater; bacterioplankton
n3:klicoveSlovo
n9:bacterial%20microdiversity n9:bacterioplankton n9:Limnohabitans n9:freshwater n9:aquatic
n3:kodStatuVydavatele
US - Spojené státy americké
n3:kontrolniKodProRIV
[A5AFBBE8E1A7]
n3:nazevZdroje
PLoS ONE
n3:obor
n20:EE
n3:pocetDomacichTvurcuVysledku
3
n3:pocetTvurcuVysledku
4
n3:projekt
n8:MEB060901 n8:GAP504%2F10%2F0566 n8:MEB060702 n8:GA206%2F08%2F0015
n3:rokUplatneniVysledku
n17:2013
n3:svazekPeriodika
8
n3:tvurceVysledku
Kasalický, Vojtěch Hahn, M. W. Jezbera, Jan Šimek, Karel
n3:wos
000318334500059
n3:zamer
n4:AV0Z60170517
s:issn
1932-6203
s:numberOfPages
13
n18:doi
10.1371/journal.pone.0058209