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Statements

Subject Item
n2:RIV%2F00216224%3A14330%2F13%3A00069322%21RIV14-MSM-14330___
rdf:type
n15:Vysledek skos:Concept
dcterms:description
We present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels. We present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels.
dcterms:title
Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules
skos:prefLabel
Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules
skos:notation
RIV/00216224:14330/13:00069322!RIV14-MSM-14330___
n15:predkladatel
n19:orjk%3A14330
n3:aktivita
n10:S n10:P
n3:aktivity
P(LG13010), S
n3:dodaniDat
n12:2014
n3:domaciTvurceVysledku
n9:3622487 n9:7676239 n9:2313871
n3:druhVysledku
n7:D
n3:duvernostUdaju
n18:S
n3:entitaPredkladatele
n21:predkladatel
n3:idSjednocenehoVysledku
76541
n3:idVysledku
RIV/00216224:14330/13:00069322
n3:jazykVysledku
n4:eng
n3:klicovaSlova
voxels; protein; tunnel; computational geometry; visualization
n3:klicoveSlovo
n11:protein n11:tunnel n11:visualization n11:computational%20geometry n11:voxels
n3:kontrolniKodProRIV
[8B8BD33B8D55]
n3:mistoKonaniAkce
Bath, Great Britain
n3:mistoVydani
Germany
n3:nazevZdroje
TPCG 2013
n3:obor
n8:IN
n3:pocetDomacichTvurcuVysledku
3
n3:pocetTvurcuVysledku
3
n3:projekt
n13:LG13010
n3:rokUplatneniVysledku
n12:2013
n3:tvurceVysledku
Jurčík, Adam Sochor, Jiří Byška, Jan
n3:typAkce
n20:WRD
n3:zahajeniAkce
2013-09-05+02:00
s:numberOfPages
8
n14:hasPublisher
Eurographics Association
n22:isbn
9783905673982
n16:organizacniJednotka
14330