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Statements

Subject Item
n2:RIV%2F00216224%3A14330%2F09%3A00029650%21RIV10-GA0-14330___
rdf:type
skos:Concept n21:Vysledek
dcterms:description
When performing complex analysis of protein molecules, chemists need to analyze the behavior of channels in protein molecules. There are various methods which can be used for analyzing channels in a static molecule. However, no specialized method that would be able to follow an opening and closing of channels in a moving molecule exists. This paper surveys several possible methods, which are able to partition channels computed in a sequence of molecule snapshots into clusters representing progress of channels in the sequence. All presented methods are built on top of previous static methods of channel computation. They process molecule samples in time and are based on computing channels independently in these samples. Computed channels are classified subsequently. The methods were piloted on real data. The results are discussed and main advantages and disadvantages of the methods are mentioned. When performing complex analysis of protein molecules, chemists need to analyze the behavior of channels in protein molecules. There are various methods which can be used for analyzing channels in a static molecule. However, no specialized method that would be able to follow an opening and closing of channels in a moving molecule exists. This paper surveys several possible methods, which are able to partition channels computed in a sequence of molecule snapshots into clusters representing progress of channels in the sequence. All presented methods are built on top of previous static methods of channel computation. They process molecule samples in time and are based on computing channels independently in these samples. Computed channels are classified subsequently. The methods were piloted on real data. The results are discussed and main advantages and disadvantages of the methods are mentioned.
dcterms:title
Computation of channels in protein dynamics Computation of channels in protein dynamics
skos:prefLabel
Computation of channels in protein dynamics Computation of channels in protein dynamics
skos:notation
RIV/00216224:14330/09:00029650!RIV10-GA0-14330___
n3:aktivita
n14:P
n3:aktivity
P(GA201/07/0927), P(LC06008)
n3:dodaniDat
n18:2010
n3:domaciTvurceVysledku
n10:1116304 n10:7676239 n10:5531292
n3:druhVysledku
n20:D
n3:duvernostUdaju
n11:S
n3:entitaPredkladatele
n6:predkladatel
n3:idSjednocenehoVysledku
307927
n3:idVysledku
RIV/00216224:14330/09:00029650
n3:jazykVysledku
n19:eng
n3:klicovaSlova
channel; cluster analysis; protein molecule; protein dynamics
n3:klicoveSlovo
n4:protein%20molecule n4:channel n4:cluster%20analysis n4:protein%20dynamics
n3:kontrolniKodProRIV
[E67AC6871CCD]
n3:mistoKonaniAkce
Rome
n3:mistoVydani
Rome
n3:nazevZdroje
Proceedings of the IADIS International Conference Applied Computing 2009
n3:obor
n15:IN
n3:pocetDomacichTvurcuVysledku
3
n3:pocetTvurcuVysledku
3
n3:projekt
n12:LC06008 n12:GA201%2F07%2F0927
n3:rokUplatneniVysledku
n18:2009
n3:tvurceVysledku
Medek, Petr Beneš, Petr Sochor, Jiří
n3:typAkce
n5:WRD
n3:zahajeniAkce
2009-01-01+01:00
s:numberOfPages
8
n13:hasPublisher
IADIS Press
n9:isbn
978-972-8924-97-3
n16:organizacniJednotka
14330