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Statements

Subject Item
n2:RIV%2F00216224%3A14310%2F10%3A00045754%21RIV11-GA0-14310___
rdf:type
n15:Vysledek skos:Concept
dcterms:description
Background Transposable elements (TEs) are considered to be an important source of genome size variation and genetic and phenotypic plasticity in eukaryotes. Most of our knowledge about TEs comes from large genomic projects and studies focused on model organisms. However, TE dynamics among related taxa from natural populations and the role of TEs at the species or supra-species level, where genome size and karyotype evolution are modulated in concert with polyploidy and chromosomal rearrangements, remain poorly understood. We focused on the holokinetic genus Eleocharis (Cyperaceae), which displays large variation in genome size and the occurrence of polyploidy and agmatoploidy/symploidy. We analyzed and quantified the long terminal repeat (LTR) retrotransposons Ty1-copia and Ty3-gypsy in relation to changes in both genome size and karyotype in Eleocharis. We also examined how this relationship is reflected in the phylogeny of Eleocharis. Background Transposable elements (TEs) are considered to be an important source of genome size variation and genetic and phenotypic plasticity in eukaryotes. Most of our knowledge about TEs comes from large genomic projects and studies focused on model organisms. However, TE dynamics among related taxa from natural populations and the role of TEs at the species or supra-species level, where genome size and karyotype evolution are modulated in concert with polyploidy and chromosomal rearrangements, remain poorly understood. We focused on the holokinetic genus Eleocharis (Cyperaceae), which displays large variation in genome size and the occurrence of polyploidy and agmatoploidy/symploidy. We analyzed and quantified the long terminal repeat (LTR) retrotransposons Ty1-copia and Ty3-gypsy in relation to changes in both genome size and karyotype in Eleocharis. We also examined how this relationship is reflected in the phylogeny of Eleocharis.
dcterms:title
Correlated evolution of LTR retrotransposons and genome size in the genus Eleocharis Correlated evolution of LTR retrotransposons and genome size in the genus Eleocharis
skos:prefLabel
Correlated evolution of LTR retrotransposons and genome size in the genus Eleocharis Correlated evolution of LTR retrotransposons and genome size in the genus Eleocharis
skos:notation
RIV/00216224:14310/10:00045754!RIV11-GA0-14310___
n3:aktivita
n14:P n14:Z
n3:aktivity
P(GA206/09/1405), P(LC06073), Z(MSM0021622416)
n3:cisloPeriodika
265
n3:dodaniDat
n7:2011
n3:domaciTvurceVysledku
n4:7248172 n4:4541057 n4:6612229 n4:1528572
n3:druhVysledku
n9:J
n3:duvernostUdaju
n5:S
n3:entitaPredkladatele
n18:predkladatel
n3:idSjednocenehoVysledku
252191
n3:idVysledku
RIV/00216224:14310/10:00045754
n3:jazykVysledku
n17:eng
n3:klicovaSlova
genome size evolution; retrotransposon dynamics; Cyperaceae; phylogeny
n3:klicoveSlovo
n6:Cyperaceae n6:retrotransposon%20dynamics n6:genome%20size%20evolution n6:phylogeny
n3:kodStatuVydavatele
GB - Spojené království Velké Británie a Severního Irska
n3:kontrolniKodProRIV
[8621A8CCF5CD]
n3:nazevZdroje
BMC Plant Biology
n3:obor
n19:EF
n3:pocetDomacichTvurcuVysledku
4
n3:pocetTvurcuVysledku
4
n3:projekt
n11:GA206%2F09%2F1405 n11:LC06073
n3:rokUplatneniVysledku
n7:2010
n3:svazekPeriodika
2010
n3:tvurceVysledku
Šmerda, Jakub Bureš, Petr Zedek, František Šmarda, Petr
n3:wos
000285308200001
n3:zamer
n8:MSM0021622416
s:issn
1471-2229
s:numberOfPages
10
n16:organizacniJednotka
14310