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Statements

Subject Item
n2:RIV%2F00023001%3A_____%2F13%3A00058731%21RIV14-MZ0-00023001
rdf:type
skos:Concept n16:Vysledek
rdfs:seeAlso
http://ac.els-cdn.com/S0169260713002174/1-s2.0-S0169260713002174-main.pdf?_tid=9fa3c7e6-73ba-11e3-8bca-00000aab0f6b&acdnat=1388673293_e0af3afb52adc1bc6acf85a91570d2d3
dcterms:description
Magnetic resonance spectroscopic imaging (MRSI) involves a huge number of spectra to be processed and analyzed. Several tools enabling MRSI data processing have been developed and widely used. However, the processing programs primarily focus on sophisticated spectra processing and offer limited support for the analysis of the calculated spectroscopic maps. In this paper the jSIPRO (java Spectroscopic Imaging PROcessing) program is presented, which is a java-based graphical interface enabling post-processing, viewing, analysis and result reporting of MRSI data. Interactive graphical processing as well as protocol controlled batch processing are available in jSIPRO. jSIPRO does not contain a built-in fitting program. Instead, it makes use of fitting programs from third parties and manages the data flows. Currently, automatic spectra processing using LCModel, TARQUIN and jMRUI programs are supported. Concentration and error values, fitted spectra, metabolite images and various parametric maps can be viewed for each calculated dataset. Metabolite images can be exported in the DICOM format either for archiving purposes or for the use in neurosurgery navigation systems. Magnetic resonance spectroscopic imaging (MRSI) involves a huge number of spectra to be processed and analyzed. Several tools enabling MRSI data processing have been developed and widely used. However, the processing programs primarily focus on sophisticated spectra processing and offer limited support for the analysis of the calculated spectroscopic maps. In this paper the jSIPRO (java Spectroscopic Imaging PROcessing) program is presented, which is a java-based graphical interface enabling post-processing, viewing, analysis and result reporting of MRSI data. Interactive graphical processing as well as protocol controlled batch processing are available in jSIPRO. jSIPRO does not contain a built-in fitting program. Instead, it makes use of fitting programs from third parties and manages the data flows. Currently, automatic spectra processing using LCModel, TARQUIN and jMRUI programs are supported. Concentration and error values, fitted spectra, metabolite images and various parametric maps can be viewed for each calculated dataset. Metabolite images can be exported in the DICOM format either for archiving purposes or for the use in neurosurgery navigation systems.
dcterms:title
jSIPRO - Analysis tool for magnetic resonance spectroscopic imaging jSIPRO - Analysis tool for magnetic resonance spectroscopic imaging
skos:prefLabel
jSIPRO - Analysis tool for magnetic resonance spectroscopic imaging jSIPRO - Analysis tool for magnetic resonance spectroscopic imaging
skos:notation
RIV/00023001:_____/13:00058731!RIV14-MZ0-00023001
n16:predkladatel
n20:ico%3A00023001
n3:aktivita
n5:I n5:P
n3:aktivity
I, P(1M0517), P(LC554), P(NT13017)
n3:cisloPeriodika
1
n3:dodaniDat
n7:2014
n3:domaciTvurceVysledku
n12:9546340 n12:6665160 n12:9958975 n12:6325823 n12:9828648
n3:druhVysledku
n4:J
n3:duvernostUdaju
n14:S
n3:entitaPredkladatele
n17:predkladatel
n3:idSjednocenehoVysledku
81994
n3:idVysledku
RIV/00023001:_____/13:00058731
n3:jazykVysledku
n19:eng
n3:klicovaSlova
DICOM export; jMRUI; TARQUIN; LCModel; Metabolite images; Spectra processing; Spectroscopic imaging
n3:klicoveSlovo
n6:Spectra%20processing n6:Spectroscopic%20imaging n6:TARQUIN n6:LCModel n6:DICOM%20export n6:jMRUI n6:Metabolite%20images
n3:kodStatuVydavatele
IE - Irsko
n3:kontrolniKodProRIV
[458D328137E0]
n3:nazevZdroje
Computer methods and programs in biomedicine
n3:obor
n8:FP
n3:pocetDomacichTvurcuVysledku
5
n3:pocetTvurcuVysledku
5
n3:projekt
n9:NT13017 n9:LC554 n9:1M0517
n3:rokUplatneniVysledku
n7:2013
n3:svazekPeriodika
112
n3:tvurceVysledku
Hájek, Milan Wagnerová, Dita Jírů, Filip Škoch, Antonín Dezortová, Monika
n3:wos
000324250400015
s:issn
0169-2607
s:numberOfPages
16
n15:doi
10.1016/j.cmpb.2013.06.018