About: The variability of Hosta Virus X isolates in the Czech Republic     Goto   Sponge   NotDistinct   Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

AttributesValues
rdf:type
Description
  • The coat protein (CP) gene DNA sequences of nine isolates of Hosta virus X (HVX) from different regions of the Czech Republic were determined and compared with sequences available in GenBank. The sequences were almost uniform, the pairwise nucleotide identities among the Czech HVX isolates were from 99 to 100%. The respective range was from 98 to 100% when sequences from the GenBank were included. Therefore, phylogenetic analyses including Maximum parsimony and Bayesian analyses of either, DNA and deduced amino acid sequences, showed close relationship among isolates. Only the group of two isolates, HVXCR1 and HVXCR8 showed significant sequence divergence in phylogenetic trees. The HVXCR1-HVXCR8 group differs from the others by the substitution of glutamine (Q) by arginine (R). Moreover, these isolates showed different symptoms on infected hosta leaves: deformation on the leaves without a mosaic or mottling. This amino acid change may, therefore, have a biological significance.
  • The coat protein (CP) gene DNA sequences of nine isolates of Hosta virus X (HVX) from different regions of the Czech Republic were determined and compared with sequences available in GenBank. The sequences were almost uniform, the pairwise nucleotide identities among the Czech HVX isolates were from 99 to 100%. The respective range was from 98 to 100% when sequences from the GenBank were included. Therefore, phylogenetic analyses including Maximum parsimony and Bayesian analyses of either, DNA and deduced amino acid sequences, showed close relationship among isolates. Only the group of two isolates, HVXCR1 and HVXCR8 showed significant sequence divergence in phylogenetic trees. The HVXCR1-HVXCR8 group differs from the others by the substitution of glutamine (Q) by arginine (R). Moreover, these isolates showed different symptoms on infected hosta leaves: deformation on the leaves without a mosaic or mottling. This amino acid change may, therefore, have a biological significance. (en)
Title
  • The variability of Hosta Virus X isolates in the Czech Republic
  • The variability of Hosta Virus X isolates in the Czech Republic (en)
skos:prefLabel
  • The variability of Hosta Virus X isolates in the Czech Republic
  • The variability of Hosta Virus X isolates in the Czech Republic (en)
skos:notation
  • RIV/62156489:43210/13:00203264!RIV14-MSM-43210___
http://linked.open...avai/predkladatel
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • S
http://linked.open...iv/cisloPeriodika
  • 3
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 113627
http://linked.open...ai/riv/idVysledku
  • RIV/62156489:43210/13:00203264
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Hosta virus X; coat protein; phylogenetic analysis (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • SK - Slovenská republika
http://linked.open...ontrolniKodProRIV
  • [BA6B11EAD83B]
http://linked.open...i/riv/nazevZdroje
  • Acta Virologica
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • 57
http://linked.open...iv/tvurceVysledku
  • Holková, Ludmila
  • Koláčková, Anna
  • Šafránková, Ivana
  • Tomšovský, Michal
http://linked.open...ain/vavai/riv/wos
  • 325040600010
issn
  • 0001-723X
number of pages
http://localhost/t...ganizacniJednotka
  • 43210
Faceted Search & Find service v1.16.118 as of Jun 21 2024


Alternative Linked Data Documents: ODE     Content Formats:   [cxml] [csv]     RDF   [text] [turtle] [ld+json] [rdf+json] [rdf+xml]     ODATA   [atom+xml] [odata+json]     Microdata   [microdata+json] [html]    About   
This material is Open Knowledge   W3C Semantic Web Technology [RDF Data] Valid XHTML + RDFa
OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 37 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software