About: Association Analysis Identifies Melampsora x columbiana Poplar Leaf Rust Resistance SNPs

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Populus species are currently being domesticated through intensive time- and resource-dependent programs for utilization in phytoremediation, wood and paper products, and conversion to biofuels. Poplar leaf rust disease can greatly reduce wood volume. Genetic resistance is effective in reducing economic losses but major resistance loci have been race-specific and can be readily defeated by the pathogen. Developing durable disease resistance requires the identification of non-racespecific loci. In the presented study, area under the disease progress curve was calculated from natural infection of Melampsora x columbiana in three consecutive years. Association analysis was performed using 412 P. trichocarpa clones genotyped with 29,355 SNPs covering 3,543 genes. We found 40 SNPs within 26 unique genes significantly associated (permutated P,0.05) with poplar rust severity. Moreover, two SNPs were repeated in all three years suggesting non-racespecificity and three additional SNPs were differentially ex Populus species are currently being domesticated through intensive time- and resource-dependent programs for utilization in phytoremediation, wood and paper products, and conversion to biofuels. Poplar leaf rust disease can greatly reduce wood volume. Genetic resistance is effective in reducing economic losses but major resistance loci have been race-specific and can be readily defeated by the pathogen. Developing durable disease resistance requires the identification of non-racespecific loci. In the presented study, area under the disease progress curve was calculated from natural infection of Melampsora x columbiana in three consecutive years. Association analysis was performed using 412 P. trichocarpa clones genotyped with 29,355 SNPs covering 3,543 genes. We found 40 SNPs within 26 unique genes significantly associated (permutated P,0.05) with poplar rust severity. Moreover, two SNPs were repeated in all three years suggesting non-racespecificity and three additional SNPs were differentially ex (en)
Title	Association Analysis Identifies Melampsora x columbiana Poplar Leaf Rust Resistance SNPs Association Analysis Identifies Melampsora x columbiana Poplar Leaf Rust Resistance SNPs (en)
skos:prefLabel	Association Analysis Identifies Melampsora x columbiana Poplar Leaf Rust Resistance SNPs Association Analysis Identifies Melampsora x columbiana Poplar Leaf Rust Resistance SNPs (en)
skos:notation	RIV/60460709:41320/13:61548!RIV14-MSM-41320___
http://linked.open...avai/predkladatel	Fakulta lesnická a dřevařská
http://linked.open...avai/riv/aktivita	S
http://linked.open...avai/riv/aktivity	S
http://linked.open...iv/cisloPeriodika	11
http://linked.open...vai/riv/dodaniDat	2014
http://linked.open...aciTvurceVysledku	Klápště, Jaroslav
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Česká zemědělská univerzita v Praze / Fakulta lesnická a dřevařská
http://linked.open...dnocenehoVysledku	62333
http://linked.open...ai/riv/idVysledku	RIV/60460709:41320/13:61548
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	poplar, association mapping, Melampsora columbiana (en)
http://linked.open.../riv/klicoveSlovo	Melampsora columbiana poplar association mapping
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[18B6582D6675]
http://linked.open...i/riv/nazevZdroje	PLoS One
http://linked.open...in/vavai/riv/obor	GK
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	8 (xsd:int)
http://linked.open...UplatneniVysledku	2013
http://linked.open...v/svazekPeriodika	8
http://linked.open...iv/tvurceVysledku	Klápště, Jaroslav El-Kassaby, Yousry Guy, Robert Azam, Shofiul Douglas, Carl Hamelin, Richard La Mantia, Jonathan Mansfield, Shawn
http://linked.open...ain/vavai/riv/wos	000327254700015
issn	1932-6203
number of pages	10 (xsd:int)
http://localhost/t...ganizacniJednotka	41320

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