About: Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Microbial rhodopsins are membrane proteins that utilize a retinal chromophore to harvest sunlight for energetic and photosensory functions. Recently, a group of novel rhodopsin sequences named 'actinorhodopsins' (ActRs) was hypothesized to exist among uncultured planktonic Actinobacteria. ActRs were discovered by mining metagenomic data obtained during the Venter Institute's Global Ocean Sampling expedition, from a hypersaline lagoon, two estuaries and a freshwater lake. On the basis of these findings, and many studies that show Actinobacteria are common inhabitants of lakes, we predicted that ActR genes would likely be present in other freshwater habitats and among the genomes of cultivated Actinobacteria. Using degenerate polymerase chain reaction primers, we discovered an ActR gene present in an actinobacterial isolate of the family Microbacteriaceae. Microbial rhodopsins are membrane proteins that utilize a retinal chromophore to harvest sunlight for energetic and photosensory functions. Recently, a group of novel rhodopsin sequences named 'actinorhodopsins' (ActRs) was hypothesized to exist among uncultured planktonic Actinobacteria. ActRs were discovered by mining metagenomic data obtained during the Venter Institute's Global Ocean Sampling expedition, from a hypersaline lagoon, two estuaries and a freshwater lake. On the basis of these findings, and many studies that show Actinobacteria are common inhabitants of lakes, we predicted that ActR genes would likely be present in other freshwater habitats and among the genomes of cultivated Actinobacteria. Using degenerate polymerase chain reaction primers, we discovered an ActR gene present in an actinobacterial isolate of the family Microbacteriaceae. (en)
Title	Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i (en)
skos:prefLabel	Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i (en)
skos:notation	RIV/60077344:_____/09:00328168!RIV10-AV0-60077344
http://linked.open...avai/riv/aktivita	Z
http://linked.open...avai/riv/aktivity	Z(AV0Z60170517)
http://linked.open...iv/cisloPeriodika	6
http://linked.open...vai/riv/dodaniDat	2010
http://linked.open...aciTvurceVysledku	Jezbera, Jan
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Biologické centrum AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	301821
http://linked.open...ai/riv/idVysledku	RIV/60077344:_____/09:00328168
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	rhodopsins; actinorhodopsin; freshwater; Actinobacteria; Superior; Erie (en)
http://linked.open.../riv/klicoveSlovo	freshwater Superior Erie actinorhodopsin rhodopsins Actinobacteria
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[9A23183C7D10]
http://linked.open...i/riv/nazevZdroje	The ISME Journal
http://linked.open...in/vavai/riv/obor	EE
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	9 (xsd:int)
http://linked.open...UplatneniVysledku	2009
http://linked.open...v/svazekPeriodika	3
http://linked.open...iv/tvurceVysledku	Doolittle, W. F. Wilhelm, S. W. Brandt, U. Hahn, M. W. Jezbera, Jan Bullerjahn, G. S. Matteson, A. R. Sharma, A. K. Sommerfeld, K.
http://linked.open...ain/vavai/riv/wos	000266530600009
http://linked.open...n/vavai/riv/zamer	Struktura, funkce a vývoj vodních ekosystémů
issn	1751-7362
number of pages	12 (xsd:int)
is http://linked.open...avai/riv/vysledek of	Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater Actinobacteria./i

Faceted Search & Find service v1.16.118 as of Jun 21 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 112 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software