About: Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types     Goto   Sponge   NotDistinct   Permalink

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Description
  • It is not well understood how the ecological status and microbial community composition of spruce swamp forests (SSF) relate to those found in bogs and fens. To clarify this, we investigated biogeochemical parameters and microbial community composition in a bog, a fen and two SSF using high throughput barcoded sequencing of the small ribosomal subunit (SSU) variable region V4. The results demonstrated that the microbial community of SSF is positioned between those of bogs and fens, and this was confirmed by in silico predicted metabolic potentials. This corresponds well with the position of SSF on the trophic gradient and reflects distinct responses of microbial communities to environmental variables. Species richness and microbial diversity increased significantly from bog to fen, with SSF in between, reflecting the variation in pH, nutrient availability and peat decomposability. The archaeal community, dominated by hydrogenotrophic methanogens, was more similar in SSF and the bog compared with the fen. The composition of the bacterial community of SSF was intermediate between those of bog and fen. However, the production of CO2 (an indicator of peat decomposability) did not differ between SSF and bog, suggesting the limiting effect of low pH and poor litter quality on the functioning of the bacterial community in SSF. These results help to clarify the transitional position of SSF between bogs and fens and showed the strong effect of environmental conditions on microbial community composition and functioning.
  • It is not well understood how the ecological status and microbial community composition of spruce swamp forests (SSF) relate to those found in bogs and fens. To clarify this, we investigated biogeochemical parameters and microbial community composition in a bog, a fen and two SSF using high throughput barcoded sequencing of the small ribosomal subunit (SSU) variable region V4. The results demonstrated that the microbial community of SSF is positioned between those of bogs and fens, and this was confirmed by in silico predicted metabolic potentials. This corresponds well with the position of SSF on the trophic gradient and reflects distinct responses of microbial communities to environmental variables. Species richness and microbial diversity increased significantly from bog to fen, with SSF in between, reflecting the variation in pH, nutrient availability and peat decomposability. The archaeal community, dominated by hydrogenotrophic methanogens, was more similar in SSF and the bog compared with the fen. The composition of the bacterial community of SSF was intermediate between those of bog and fen. However, the production of CO2 (an indicator of peat decomposability) did not differ between SSF and bog, suggesting the limiting effect of low pH and poor litter quality on the functioning of the bacterial community in SSF. These results help to clarify the transitional position of SSF between bogs and fens and showed the strong effect of environmental conditions on microbial community composition and functioning. (en)
Title
  • Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types
  • Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types (en)
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  • Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types
  • Microbial community composition and in silico predicted metabolic potential reflect biogeochemical gradients between distinct peatland types (en)
skos:notation
  • RIV/60076658:12310/14:43887041!RIV15-GA0-12310___
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(GA13-17398S), P(GP14-17403P)
http://linked.open...iv/cisloPeriodika
  • 3
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 29154
http://linked.open...ai/riv/idVysledku
  • RIV/60076658:12310/14:43887041
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Archaea; bacteria; microbial diversity; spruce swamp forest; fen; bog (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • US - Spojené státy americké
http://linked.open...ontrolniKodProRIV
  • [AA6C21B328DE]
http://linked.open...i/riv/nazevZdroje
  • FEMS Microbiology Ecology
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • 90
http://linked.open...iv/tvurceVysledku
  • Bárta, Jiří
  • Urbanová, Zuzana
http://linked.open...ain/vavai/riv/wos
  • 000346057900009
issn
  • 0168-6496
number of pages
http://bibframe.org/vocab/doi
  • 10.1111/1574-6941.12422
http://localhost/t...ganizacniJednotka
  • 12310
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