About: Fluorescence-based AFLPs occur as the most suitable marker system for oilseed rape cultivar identification.     Goto   Sponge   NotDistinct   Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

AttributesValues
rdf:type
Description
  • Three different types of molecular markers, RAPD, SSR and fluorescence-based AFLP, were evaluated and compared for their ability to identify oilseed rape cultivars. The direct comparison of RAPD, SSR and AFLP approaches in cultivar identification showedthat the AFLP methodology detected polymorphisms more efficiently than either RAPD or SSR methods. For the characterisation of six oilseed rape cultivars, 60 RAPD primers were tested and only eight of them (14%) detected sufficient levels of polymorphism. Five microsatellites out of fifteen tested were polymorphic, but in all loci, except one, only two different alleles were detected. This result indicated the limited degree of polymorphism found in Brassica napus. Each of the six tested AFLP combinations detected polymorphisms, the best combination (M-CAA/E-ACT) had 26% polymorphic peaks from a total of 90 peaks and could distinguish the analysed cultivars and 4 out of 5 core lines of cultivars. The results presented show that florescence-based AFLP i
  • Three different types of molecular markers, RAPD, SSR and fluorescence-based AFLP, were evaluated and compared for their ability to identify oilseed rape cultivars. The direct comparison of RAPD, SSR and AFLP approaches in cultivar identification showedthat the AFLP methodology detected polymorphisms more efficiently than either RAPD or SSR methods. For the characterisation of six oilseed rape cultivars, 60 RAPD primers were tested and only eight of them (14%) detected sufficient levels of polymorphism. Five microsatellites out of fifteen tested were polymorphic, but in all loci, except one, only two different alleles were detected. This result indicated the limited degree of polymorphism found in Brassica napus. Each of the six tested AFLP combinations detected polymorphisms, the best combination (M-CAA/E-ACT) had 26% polymorphic peaks from a total of 90 peaks and could distinguish the analysed cultivars and 4 out of 5 core lines of cultivars. The results presented show that florescence-based AFLP i (en)
  • Tři odlišné typy molekulárních markerů, RAPD, SSR a AFLP založené na fluorescenci byly posouzeny z hlediska vhodnosti pro identifikaci odrůd řepky olejky. Přímé srovnání RAPD, SSR a AFLP postupů při identifikaci kultivarů ukázalo, že AFLP metoda detekujepolymorfismus efektivněji než jiné RAPD a SSR metody. Pro charakteristiku šesti odrůd řepky olejky bylo testováno 60 primerů a jen devět z nich prokázalo vyšší míru polymorfismu. Pět mikrosatelitů z patnácti vykázalo polymorfismus, ale v all Alenách, kromě jedné, kde byly detekovány jen 2 odlišné alely. Výsledky ukazují omezenou míru polymorfismu u řepky olejky. Každá ze šesti AFLP testovaných kombinací detekovala polymorfismus, nejlépe kombinace (M-CAA/E-ACT) měla 26% polymorfních píků z celkem 90 píků a může odlišovat analyzované odrůdy a 4 z 5 linií odrůd. Výsledky dále ukazují, že AFLP založená na fluorescenci je více vhodná oproti RAPD a SSR. (cs)
Title
  • Fluorescence-based AFLPs occur as the most suitable marker system for oilseed rape cultivar identification.
  • Fluorescence-based AFLPs occur as the most suitable marker system for oilseed rape cultivar identification. (en)
  • AFLP markery založené nafluorescenci jako nejvhodnější metoda identifikace odrů řepky olejky. (cs)
skos:prefLabel
  • Fluorescence-based AFLPs occur as the most suitable marker system for oilseed rape cultivar identification.
  • Fluorescence-based AFLPs occur as the most suitable marker system for oilseed rape cultivar identification. (en)
  • AFLP markery založené nafluorescenci jako nejvhodnější metoda identifikace odrů řepky olejky. (cs)
skos:notation
  • RIV/60076658:12220/04:00005554!RIV06-MZE-12220___
http://linked.open.../vavai/riv/strany
  • 161-173
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(QD1040), Z(MSM 122200002)
http://linked.open...iv/cisloPeriodika
  • 2
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 564616
http://linked.open...ai/riv/idVysledku
  • RIV/60076658:12220/04:00005554
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Oilseed rape (Brassica napus); cultivars; identification; RAPD, SSR and AFLP markers; polymorphism; methodology; genes (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • US - Spojené státy americké
http://linked.open...ontrolniKodProRIV
  • [B6BDEC37F9C9]
http://linked.open...i/riv/nazevZdroje
  • Genetics
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • 45
http://linked.open...iv/tvurceVysledku
  • Sobotka, Roman
  • Čurn, Vladislav
  • Dolanská, Lenka
http://linked.open...n/vavai/riv/zamer
issn
  • 0016-6731
number of pages
http://localhost/t...ganizacniJednotka
  • 12220
Faceted Search & Find service v1.16.118 as of Jun 21 2024


Alternative Linked Data Documents: ODE     Content Formats:   [cxml] [csv]     RDF   [text] [turtle] [ld+json] [rdf+json] [rdf+xml]     ODATA   [atom+xml] [odata+json]     Microdata   [microdata+json] [html]    About   
This material is Open Knowledge   W3C Semantic Web Technology [RDF Data] Valid XHTML + RDFa
OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 47 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software