About: Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D

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About: Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	The software is used for generating series of two-dimensional sections through a volume filled with ellipsoids, cylinders and fibres with a priori known statistical properties. Arbitrary series of images are produced in order to represent models of histological structures, such as cells and fibres of the extracellular matrix forming biological tissues. These images represent either serial consecutive sections or sections sampled in a systematic uniform manner. The user can set the number and types of classes of three-dimensional objects (ellipsoids, cylinders), dimensions of the reference volume, size of the generated images, the number of objects and sections to be generated, length-to-width ratio and volume fraction of the objects. Three perpendicular series of sections through the same reference volume and the same objects may be generated, thus testing the isotropy of the objects. The output of the simulation is stored as three series of image files together with a detailed report containing the s The software is used for generating series of two-dimensional sections through a volume filled with ellipsoids, cylinders and fibres with a priori known statistical properties. Arbitrary series of images are produced in order to represent models of histological structures, such as cells and fibres of the extracellular matrix forming biological tissues. These images represent either serial consecutive sections or sections sampled in a systematic uniform manner. The user can set the number and types of classes of three-dimensional objects (ellipsoids, cylinders), dimensions of the reference volume, size of the generated images, the number of objects and sections to be generated, length-to-width ratio and volume fraction of the objects. Three perpendicular series of sections through the same reference volume and the same objects may be generated, thus testing the isotropy of the objects. The output of the simulation is stored as three series of image files together with a detailed report containing the s (en)
Title	Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D (en)
skos:prefLabel	Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D (en)
skos:notation	RIV/49777513:23520/09:00502789!RIV10-GA0-23520___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(GA106/09/0740)
http://linked.open...vai/riv/dodaniDat	2010
http://linked.open...aciTvurceVysledku	Kochová, Petra Tonar, Zbyněk Cimrman, Robert
http://linked.open.../riv/druhVysledku	R - Software
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Západočeská univerzita v Plzni / Fakulta aplikovaných věd
http://linked.open...dnocenehoVysledku	316230
http://linked.open...ai/riv/idVysledku	RIV/49777513:23520/09:00502789
http://linked.open...terniIdentifikace	gensei-2009.2
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	simulation; histological sections; stereology; quantification; volume, surface and length (en)
http://linked.open.../riv/klicoveSlovo	surface and length simulation volume quantification stereology histological sections
http://linked.open...ontrolniKodProRIV	[554D01E4DBB8]
http://linked.open.../licencniPoplatek	N - Poskytovatel licence na výsledek nepožaduje licenční poplatek
http://linked.open...okalizaceVysledku	http://code.google.com/p/gensei/ 2. http://docs.sfepy.org/gensei/doc-devel/
http://linked.open...in/vavai/riv/obor	EA
http://linked.open...ichTvurcuVysledku	3 (xsd:int)
http://linked.open...cetTvurcuVysledku	3 (xsd:int)
http://linked.open...vavai/riv/projekt	Microstructure oriented hierarchical modeling of brain perfusion for CT based cerebral blood flow evaluation
http://linked.open...UplatneniVysledku	2009
http://linked.open...echnickeParametry	ZČU, Univerzitní 8, R. Cimrman, tel.: 377 634 711, cimrman3@ntc.zcu.cz. Umožňuje simulovat histologické řezy buňkami a vlákny a hodnocení jejich objemů, povrchů a délek.
http://linked.open...iv/tvurceVysledku	Kochová, Petra Tonar, Zbyněk Cimrman, Robert
http://linked.open...avai/riv/vlastnik	Západočeská univerzita v Plzni, Fakulta aplikovaných věd, Katedra mechaniky
http://linked.open...itiJinymSubjektem	A - Nabytí licence je nutné vždy
http://localhost/t...ganizacniJednotka	23520
is http://linked.open...avai/riv/vysledek of	Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D Gensei: software for generating serial sections through objects with known statistical properties and simulating stereological quantification in 3D

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