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Description
  • Classification methods of DNA most commonly use comparison of the differences in DNA symbolic records, which requires the global multiple sequence alignment. This solution is often inappropriate, causing a number of imprecisions and requires additional user intervention for exact alignment of the similar segments. The similar segments in DNA represented as a signal are characterized by a similar shape of the curve. The DNA alignment in genomic signals may adjust whole sections not only individual symbols. The dynamic time warping (DTW) is suitable for this purpose and can replace the multiple alignment of symbolic sequences in applications, such as phylogenetic analysis.
  • Classification methods of DNA most commonly use comparison of the differences in DNA symbolic records, which requires the global multiple sequence alignment. This solution is often inappropriate, causing a number of imprecisions and requires additional user intervention for exact alignment of the similar segments. The similar segments in DNA represented as a signal are characterized by a similar shape of the curve. The DNA alignment in genomic signals may adjust whole sections not only individual symbols. The dynamic time warping (DTW) is suitable for this purpose and can replace the multiple alignment of symbolic sequences in applications, such as phylogenetic analysis. (en)
Title
  • Classification of genomic signals using dynamic time warping
  • Classification of genomic signals using dynamic time warping (en)
skos:prefLabel
  • Classification of genomic signals using dynamic time warping
  • Classification of genomic signals using dynamic time warping (en)
skos:notation
  • RIV/00216305:26220/13:PU105321!RIV14-GA0-26220___
http://linked.open...avai/predkladatel
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  • P(ED1.100/02/0123), P(GAP102/11/1068), S
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  • 10
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  • 65613
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  • RIV/00216305:26220/13:PU105321
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  • phylogenetics, dynamic time warping, genomic signals (en)
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  • GB - Spojené království Velké Británie a Severního Irska
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  • [49184758AAEC]
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  • BMC BIOINFORMATICS
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  • 14
http://linked.open...iv/tvurceVysledku
  • Babula, Petr
  • Kizek, René
  • Provazník, Ivo
  • Vítek, Martin
  • Škutková, Helena
http://linked.open...ain/vavai/riv/wos
  • 000324248300001
issn
  • 1471-2105
number of pages
http://bibframe.org/vocab/doi
  • 10.1186/1471-2105-14-S10-S1
http://localhost/t...ganizacniJednotka
  • 26220
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