About: Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules     Goto   Sponge   NotDistinct   Permalink

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Description
  • We present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels.
  • We present a novel geometry-based method for computing asymmetric tunnels and voids in proteins, approximating their real shape with selected precision. Our method combines ideas from Voronoi and grid based approaches for protein analysis. We represent tunnels in protein using voxel data grid which allows us to store their shape more accurately. Our algorithm employs a tunnel skeleton computed using Voronoi diagram. The skeleton allows us to perform grid computation in a bounded space, with lower time and memory demands, and easily identify and measure individual tunnels. (en)
Title
  • Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules
  • Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules (en)
skos:prefLabel
  • Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules
  • Geometry-based Algorithm for Detection of Asymmetric Tunnels in Protein Molecules (en)
skos:notation
  • RIV/00216224:14330/13:00069322!RIV14-MSM-14330___
http://linked.open...avai/predkladatel
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(LG13010), S
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 76541
http://linked.open...ai/riv/idVysledku
  • RIV/00216224:14330/13:00069322
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • voxels; protein; tunnel; computational geometry; visualization (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...ontrolniKodProRIV
  • [8B8BD33B8D55]
http://linked.open...v/mistoKonaniAkce
  • Bath, Great Britain
http://linked.open...i/riv/mistoVydani
  • Germany
http://linked.open...i/riv/nazevZdroje
  • TPCG 2013
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
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http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...iv/tvurceVysledku
  • Sochor, Jiří
  • Byška, Jan
  • Jurčík, Adam
http://linked.open...vavai/riv/typAkce
http://linked.open.../riv/zahajeniAkce
number of pages
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  • Eurographics Association
https://schema.org/isbn
  • 9783905673982
http://localhost/t...ganizacniJednotka
  • 14330
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