About: CytoPacq: A web-based toolbox for simulation of 3D cell imaging and quality control of related image analysis

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: CytoPacq: A web-based toolbox for simulation of 3D cell imaging and quality control of related image analysis Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Fluorescence microscopy still faces the problem of the quality of cell image analysis results. Degradations caused by cell preparation, optics and electronics considerably affect most 2D and 3D cell image data acquired using optical microscopy. That is why image processing algorithms applied to these data typically offer imprecise and unreliable results. As the ground truth for given image data is not available in most experiments, the outputs of different image analysis methods can be neither verified nor compared to each other. Some papers solve this problem partially with estimates of ground truth by experts in the field (biologists or physicians). However, in many cases, such a ground truth estimate is very subjective and strongly varies between different experts. In order to overcome these difficulties, we have created a toolbox [1] that can generate 3D digital phantoms of specific cellular components along with their corresponding images degraded by specific optics and electronics. Fluorescence microscopy still faces the problem of the quality of cell image analysis results. Degradations caused by cell preparation, optics and electronics considerably affect most 2D and 3D cell image data acquired using optical microscopy. That is why image processing algorithms applied to these data typically offer imprecise and unreliable results. As the ground truth for given image data is not available in most experiments, the outputs of different image analysis methods can be neither verified nor compared to each other. Some papers solve this problem partially with estimates of ground truth by experts in the field (biologists or physicians). However, in many cases, such a ground truth estimate is very subjective and strongly varies between different experts. In order to overcome these difficulties, we have created a toolbox [1] that can generate 3D digital phantoms of specific cellular components along with their corresponding images degraded by specific optics and electronics. (en)
Title	CytoPacq: A web-based toolbox for simulation of 3D cell imaging and quality control of related image analysis CytoPacq: A web-based toolbox for simulation of 3D cell imaging and quality control of related image analysis (en)
skos:prefLabel	CytoPacq: A web-based toolbox for simulation of 3D cell imaging and quality control of related image analysis CytoPacq: A web-based toolbox for simulation of 3D cell imaging and quality control of related image analysis (en)
skos:notation	RIV/00216224:14330/10:00044041!RIV11-MSM-14330___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(2B06052), P(LC535)
http://linked.open...vai/riv/dodaniDat	2011
http://linked.open...aciTvurceVysledku	Kozubek, Michal Svoboda, David Stejskal, Stanislav
http://linked.open.../riv/druhVysledku	O - Ostatní výsledky nezařaditelné do žádného z výše uvedených druhů výsledku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Fakulta informatiky
http://linked.open...dnocenehoVysledku	252657
http://linked.open...ai/riv/idVysledku	RIV/00216224:14330/10:00044041
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	digital phantom; synthetic image; fluorescence microscopy; 3D cell imaging (en)
http://linked.open.../riv/klicoveSlovo	fluorescence microscopy 3D cell imaging digital phantom synthetic image
http://linked.open...ontrolniKodProRIV	[A18C8F22AE32]
http://linked.open...in/vavai/riv/obor	JD
http://linked.open...ichTvurcuVysledku	3 (xsd:int)
http://linked.open...cetTvurcuVysledku	3 (xsd:int)
http://linked.open...vavai/riv/projekt	Determination of markers, screening and early diagnostics of cancer diseases using highly automated processing of multidimensional biomedical images Chromosome dynamics and organization during the cell cycle in normal and pathologic conditions
http://linked.open...UplatneniVysledku	2010
http://linked.open...iv/tvurceVysledku	Svoboda, David Kozubek, Michal Stejskal, Stanislav
http://localhost/t...ganizacniJednotka	14330

Faceted Search & Find service v1.16.116 as of Feb 22 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3239 as of Feb 22 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 82 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software