About: Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Statistical methods are proposed for analyzing the experimental design, preliminary results, and final results of phylogenetic studies of organelle DNA sequence at low taxonomic levels. Such studies require sampling numerous individuals, many of which share identical haplotypes. The proportions of the haplotypes sampled can help answer the following questions: (1) Is one haplotype so dominant that the particular DNA region is without meaningful variation within the scope of the study? (2) Were all prevalent haplotypes found? (3) What are the proportions of each haplotype within the studied group? (4) What percentage of the studied group can be confidently asserted to belong to the haplotypes that were found? Examples are given in which the statistics techniques are applied to data drawn from the botanical literature. Tables are included as a quick reference for the researcher who wishes to circumvent calculation. A Microsoft Excel 2000 spreadsheet (titled HaploPro. Statistical methods are proposed for analyzing the experimental design, preliminary results, and final results of phylogenetic studies of organelle DNA sequence at low taxonomic levels. Such studies require sampling numerous individuals, many of which share identical haplotypes. The proportions of the haplotypes sampled can help answer the following questions: (1) Is one haplotype so dominant that the particular DNA region is without meaningful variation within the scope of the study? (2) Were all prevalent haplotypes found? (3) What are the proportions of each haplotype within the studied group? (4) What percentage of the studied group can be confidently asserted to belong to the haplotypes that were found? Examples are given in which the statistics techniques are applied to data drawn from the botanical literature. Tables are included as a quick reference for the researcher who wishes to circumvent calculation. A Microsoft Excel 2000 spreadsheet (titled HaploPro. (en)
Title	Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success (en)
skos:prefLabel	Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success (en)
skos:notation	RIV/00216224:14310/07:00022667!RIV11-MSM-14310___
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(LC06073), Z(MSM0021622416)
http://linked.open...iv/cisloPeriodika	3
http://linked.open...vai/riv/dodaniDat	2011
http://linked.open...aciTvurceVysledku	Bureš, Petr
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Přírodovědecká fakulta
http://linked.open...dnocenehoVysledku	421135
http://linked.open...ai/riv/idVysledku	RIV/00216224:14310/07:00022667
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	bulking; haplotype frequency confidence intervals; inclusion-exclusion principle; intraspecific sequence studies; phylogeography; proportion estimates (en)
http://linked.open.../riv/klicoveSlovo	phylogeography bulking haplotype frequency confidence intervals inclusion-exclusion principle intraspecific sequence studies proportion estimates
http://linked.open...odStatuVydavatele	AT - Rakouská republika
http://linked.open...ontrolniKodProRIV	[D583A9F78572]
http://linked.open...i/riv/nazevZdroje	Taxon
http://linked.open...in/vavai/riv/obor	EF
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	3 (xsd:int)
http://linked.open...vavai/riv/projekt	Biodiversity Research Center
http://linked.open...UplatneniVysledku	2007
http://linked.open...v/svazekPeriodika	56/2007
http://linked.open...iv/tvurceVysledku	Bureš, Petr Stoneberg Holt, Sierra Dawn Holt, Jason A.
http://linked.open...ain/vavai/riv/wos	000249247400020
http://linked.open...n/vavai/riv/zamer	Diversity of Biotic Communities and Populations: Causal Analysis of variation in space and time
issn	0040-0262
number of pages	10 (xsd:int)
http://localhost/t...ganizacniJednotka	14310
is http://linked.open...avai/riv/vysledek of	Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success Experimental design in intraspecific organelle DNA sequence studies III: statistical measures of sampling success

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