About: Application of the new insertion-deletion polymorphism kit for forensic identification and parentage testing on the Czech population

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About: Application of the new insertion-deletion polymorphism kit for forensic identification and parentage testing on the Czech population Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
rdfs:seeAlso	http://dx.doi.org/10.1007/s00414-011-0649-3
Description	We genotyped 55 unrelated Czech individuals. We also genotyped 11 trios to analyze DIPplex Kit (QIAGEN, Germany) suitability for parentage testing. DIPplex Kit contains 30 diallelic autosomal markers. INDELs in DIPplex Kit were tested with linkage disequilibrium test, which showed that they could be treated as independent markers. All 30 loci fulfill Hardy-Weinberg equilibrium. There were several significant differences between Czech and African populations, but no significant ones within European population. Probabilityof a match in the Czech population was 1 in 6.8x1012; combined power of discrimination was 99.9999999999%.Average paternity index was 1.13-1.77 for each locus;combined paternity index reached about 27,000 for a set of 30 loci. The DIPplex kit is useful as an additional panel of markers in paternity cases when mutations in STR polymorphisms are present. For application on degraded or inhibited samples, further optimization of buffer and primer concentrations is needed. We genotyped 55 unrelated Czech individuals. We also genotyped 11 trios to analyze DIPplex Kit (QIAGEN, Germany) suitability for parentage testing. DIPplex Kit contains 30 diallelic autosomal markers. INDELs in DIPplex Kit were tested with linkage disequilibrium test, which showed that they could be treated as independent markers. All 30 loci fulfill Hardy-Weinberg equilibrium. There were several significant differences between Czech and African populations, but no significant ones within European population. Probabilityof a match in the Czech population was 1 in 6.8x1012; combined power of discrimination was 99.9999999999%.Average paternity index was 1.13-1.77 for each locus;combined paternity index reached about 27,000 for a set of 30 loci. The DIPplex kit is useful as an additional panel of markers in paternity cases when mutations in STR polymorphisms are present. For application on degraded or inhibited samples, further optimization of buffer and primer concentrations is needed. (en)
Title	Application of the new insertion-deletion polymorphism kit for forensic identification and parentage testing on the Czech population Application of the new insertion-deletion polymorphism kit for forensic identification and parentage testing on the Czech population (en)
skos:prefLabel	Application of the new insertion-deletion polymorphism kit for forensic identification and parentage testing on the Czech population Application of the new insertion-deletion polymorphism kit for forensic identification and parentage testing on the Czech population (en)
skos:notation	RIV/00216208:11140/13:00009640!RIV14-MSM-11140___
http://linked.open...avai/predkladatel	Lékařská fakulta v Plzni
http://linked.open...avai/riv/aktivita	I
http://linked.open...avai/riv/aktivity	I
http://linked.open...iv/cisloPeriodika	1
http://linked.open...vai/riv/dodaniDat	2014
http://linked.open...aciTvurceVysledku	Zidkova, Anastassiya Hořínek, Aleš Korabečná, Marie
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Univerzita Karlova v Praze / Lékařská fakulta v Plzni
http://linked.open...dnocenehoVysledku	61825
http://linked.open...ai/riv/idVysledku	RIV/00216208:11140/13:00009640
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	PCR multiplex; Forensic genetics; Population study; Parentage testing; INDEL polymorphism (en)
http://linked.open.../riv/klicoveSlovo	Forensic genetics INDEL polymorphism PCR multiplex Parentage testing Population study
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[EAF3BD7DE2F9]
http://linked.open...i/riv/nazevZdroje	International Journal of Legal Medicine
http://linked.open...in/vavai/riv/obor	EB
http://linked.open...ichTvurcuVysledku	3 (xsd:int)
http://linked.open...cetTvurcuVysledku	4 (xsd:int)
http://linked.open...UplatneniVysledku	2013
http://linked.open...v/svazekPeriodika	127
http://linked.open...iv/tvurceVysledku	Hořínek, Aleš Kebrdlová, Věra Korabečná, Marie Zidkova, Anastassiya
http://linked.open...ain/vavai/riv/wos	000313164100002
issn	0937-9827
number of pages	4 (xsd:int)
http://bibframe.org/vocab/doi	10.1007/s00414-011-0649-3
http://localhost/t...ganizacniJednotka	11140

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