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rdf:type
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Description
| - Byla stanovena úplná nukleotidová sekvence genomu bakterie Rhodobacter capsulatus. Genom obsahuje cirkularní chromozom 3,5 Mb a cirkularní plazmid 134 kb. Celková sekvence byla stanovena kráčením po uspořádaných kosmidových klonech. Anotace výsledné sekvence včetně sestavení buněčného metabolizmu bylo provedeno pomocí systému ERGO. V genomu bylo nalezeno 3709 potenciálních genů, z toho k 2392 genům (65 procent) bylo možno nalézt funkční přiřazení. Neobvyklým rysem genomové sekvence je početné zastoupení cizorodých, především fágových úseků. (cs)
- The genome of Rhodobacter capsulatus has been completely sequenced. It consists of a single chromosome containing 3.5 Mb and a circular plasmid of 134 kb. This effort, started in 1992, began with a fine-structure restriction map of an overlapping set of cosmids that covered the genome. Cosmid sequencing led to a gapped genome that was filled by primer walking on the chromosome and by using lambda clones. Methods had to be developed to handle strong stops in the high GC (68%) inserts. Annotation was done with the ERGO system at Integrated Genomics, as was the reconstruction of the cell's metabolism. It was possible to recognize 3709 orfs of which functional assignments could be made with high confidence to 2392 (65%). Unusual features include the presence of numerous cryptic phage genomes embedded in the chromosome.
- The genome of Rhodobacter capsulatus has been completely sequenced. It consists of a single chromosome containing 3.5 Mb and a circular plasmid of 134 kb. This effort, started in 1992, began with a fine-structure restriction map of an overlapping set of cosmids that covered the genome. Cosmid sequencing led to a gapped genome that was filled by primer walking on the chromosome and by using lambda clones. Methods had to be developed to handle strong stops in the high GC (68%) inserts. Annotation was done with the ERGO system at Integrated Genomics, as was the reconstruction of the cell's metabolism. It was possible to recognize 3709 orfs of which functional assignments could be made with high confidence to 2392 (65%). Unusual features include the presence of numerous cryptic phage genomes embedded in the chromosome. (en)
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Title
| - Genom Rhodobacter capsulatus (cs)
- The Rhodobacter capsulatus genome
- The Rhodobacter capsulatus genome (en)
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skos:prefLabel
| - Genom Rhodobacter capsulatus (cs)
- The Rhodobacter capsulatus genome
- The Rhodobacter capsulatus genome (en)
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skos:notation
| - RIV/68378050:_____/01:00021977!RIV07-AV0-68378050
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http://linked.open.../vavai/riv/strany
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http://linked.open...avai/riv/aktivita
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http://linked.open...avai/riv/aktivity
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http://linked.open...iv/cisloPeriodika
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http://linked.open...vai/riv/dodaniDat
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http://linked.open...aciTvurceVysledku
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http://linked.open.../riv/druhVysledku
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http://linked.open...iv/duvernostUdaju
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http://linked.open...titaPredkladatele
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http://linked.open...dnocenehoVysledku
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http://linked.open...ai/riv/idVysledku
| - RIV/68378050:_____/01:00021977
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http://linked.open...riv/jazykVysledku
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http://linked.open.../riv/klicovaSlova
| - genome; expression; gene (en)
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http://linked.open.../riv/klicoveSlovo
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http://linked.open...odStatuVydavatele
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http://linked.open...ontrolniKodProRIV
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http://linked.open...i/riv/nazevZdroje
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http://linked.open...in/vavai/riv/obor
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http://linked.open...ichTvurcuVysledku
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http://linked.open...cetTvurcuVysledku
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http://linked.open...UplatneniVysledku
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http://linked.open...v/svazekPeriodika
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http://linked.open...iv/tvurceVysledku
| - Ivanova, N.
- Pačes, Jan
- Pačes, Václav
- Vlček, Čestmír
- Ulbrich, P.
- Pečenková, Tamara
- Mazur, M.
- Haselkorn, R.
- Lapidus, A.
- Fonstein, M.
- Cox, R.
- Kapatral, V.
- Kogan, Y.
- Kyrpides, N.
- Los, T.
- Lykidis, A.
- Mikhailova, N.
- Milgram, A.
- Rebrekov, D.
- Reznik, G.
- Vasieva, O.
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http://linked.open...n/vavai/riv/zamer
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issn
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number of pages
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