About: A System for Automated Acquisition of 3D Biomedical Images Using Confocal Microscopy

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	The described software system for the coarse-to-fine positioning of XY motorized microscope stage allows us interactive control of image acquisition in confocal microscopy. An image captured through a low-resolution objective serves as navigation map where the user points to positions or areas of interest in which a high-resolution image will be captured. Our contribution presents an extension of a two-level coarse/fine algorithm to a multi-level environment. Moreover, the system is accompanied by algorithms that compensate both uneven illumination of neighbouring captured images (neighbouring fields of view) and light attenuation of confocal 3D images with depth, which are effects observed in confocal microscopy. By applying these algorithms resulting images of high quality are obtained. The system also enables us acquisition of confocal data sets for performing 3D reconstructions of large biological specimens The described software system for the coarse-to-fine positioning of XY motorized microscope stage allows us interactive control of image acquisition in confocal microscopy. An image captured through a low-resolution objective serves as navigation map where the user points to positions or areas of interest in which a high-resolution image will be captured. Our contribution presents an extension of a two-level coarse/fine algorithm to a multi-level environment. Moreover, the system is accompanied by algorithms that compensate both uneven illumination of neighbouring captured images (neighbouring fields of view) and light attenuation of confocal 3D images with depth, which are effects observed in confocal microscopy. By applying these algorithms resulting images of high quality are obtained. The system also enables us acquisition of confocal data sets for performing 3D reconstructions of large biological specimens (en)
Title	A System for Automated Acquisition of 3D Biomedical Images Using Confocal Microscopy A System for Automated Acquisition of 3D Biomedical Images Using Confocal Microscopy (en)
skos:prefLabel	A System for Automated Acquisition of 3D Biomedical Images Using Confocal Microscopy A System for Automated Acquisition of 3D Biomedical Images Using Confocal Microscopy (en)
skos:notation	RIV/67985823:_____/09:00330404!RIV10-MSM-67985823
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GA102/08/0691), P(GA304/09/0733), P(IAA100110502), P(LC06063), P(MEB080831), Z(AV0Z50110509), Z(MSM6840770012)
http://linked.open...vai/riv/dodaniDat	2010
http://linked.open...aciTvurceVysledku	Michálek, Jan Čapek, Martin Janáček, Jiří Kubínová, Lucie
http://linked.open.../riv/druhVysledku	D - Článek ve sborníku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Fyziologický ústav AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	301621
http://linked.open...ai/riv/idVysledku	RIV/67985823:_____/09:00330404
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	confocal laser scanning microscope; illumination inhomogeneity; automated acquisition system (en)
http://linked.open.../riv/klicoveSlovo	automated acquisition system confocal laser scanning microscope illumination inhomogeneity
http://linked.open...ontrolniKodProRIV	[9CB64C5948A2]
http://linked.open...v/mistoKonaniAkce	Graz
http://linked.open...i/riv/mistoVydani	Graz
http://linked.open...i/riv/nazevZdroje	MC 2009 : Microscopy Conference
http://linked.open...in/vavai/riv/obor	JD
http://linked.open...ichTvurcuVysledku	4 (xsd:int)
http://linked.open...cetTvurcuVysledku	6 (xsd:int)
http://linked.open...vavai/riv/projekt	Visualization and processing of 3D images captured by a confocal microscope using graphics processor unit programming and virtual reality Three-dimensional arrangement and remodelation of the capillary bed of placentas from pregnancies complicated by type I diabetes mellitus Flurescence microscopy in biological and medical research Segmentation, visualization and measurement of fibrous structures in 3D Spatial statistics of 3D confocal images of capillary network
http://linked.open...UplatneniVysledku	2009
http://linked.open...iv/tvurceVysledku	Janáček, Jiří Kubínová, Lucie Michálek, Jan Čapek, Martin Tomori, Z. Hozman, J.
http://linked.open...vavai/riv/typAkce	WRD - Světová
http://linked.open.../riv/zahajeniAkce	2009-08-30 (xsd:date)
http://linked.open...n/vavai/riv/zamer	Výzkum molekulárních a buněčných základů fyziologických a patofyziologických procesů s cílem objasnit mechanismy vzniku závažných onemocnění člověka Transdisciplinární výzkum v oblasti biomedicínského inženýrství II
number of pages	2 (xsd:int)
http://purl.org/ne...btex#hasPublisher	Verlag der Technischen Universität
https://schema.org/isbn	978-3-85125-062-6

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