About: Yeast Colony Counter

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	The colony counter provides batch processing of a series of images of Petri dishes containing yeast colonies. It is aimed for a research laboratory using standard imaging equipment, where manual manipulation of the dishes is used, rather than specialized single-purpose camera system. It is assumed that dark background is used in the images. The tool evaluates two figures for the images: the relative coverage of the dish, and the number of colonies in the dish. It provides two modes of operation: automatic or semi-automatic. In the automatic mode, it processes the batch of images without any user intervention. In the semi-automatic mode, it first processes a dish and then it provides the user with an editor, where he can interactively correct the result of counting. The tool performs fully automatic thresholding of the image, dish localization and image segmentation. Two image formats are accepted at this moment: .jpg and .tiff. Other formats may be added on request. The colony counter provides batch processing of a series of images of Petri dishes containing yeast colonies. It is aimed for a research laboratory using standard imaging equipment, where manual manipulation of the dishes is used, rather than specialized single-purpose camera system. It is assumed that dark background is used in the images. The tool evaluates two figures for the images: the relative coverage of the dish, and the number of colonies in the dish. It provides two modes of operation: automatic or semi-automatic. In the automatic mode, it processes the batch of images without any user intervention. In the semi-automatic mode, it first processes a dish and then it provides the user with an editor, where he can interactively correct the result of counting. The tool performs fully automatic thresholding of the image, dish localization and image segmentation. Two image formats are accepted at this moment: .jpg and .tiff. Other formats may be added on request. (en)
Title	Yeast Colony Counter Yeast Colony Counter (en)
skos:prefLabel	Yeast Colony Counter Yeast Colony Counter (en)
skos:notation	RIV/67985556:_____/10:00348217!RIV11-MSM-67985556
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(1M0567), Z(AV0Z10750506)
http://linked.open...vai/riv/dodaniDat	2011
http://linked.open...aciTvurceVysledku	Schier, Jan Kovář, Bohumil
http://linked.open.../riv/druhVysledku	R - Software
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...onomickeParametry	1500000
http://linked.open...titaPredkladatele	Ústav teorie informace a automatizace AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	299108
http://linked.open...ai/riv/idVysledku	RIV/67985556:_____/10:00348217
http://linked.open...terniIdentifikace	Yeast Colony Counter
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	Automated colony counting; Image processing; Fast radial transform; Matlab; Petri dish evaluation (en)
http://linked.open.../riv/klicoveSlovo	Petri dish evaluation Image processing Matlab Fast radial transform Automated colony counting
http://linked.open...ontrolniKodProRIV	[774CDF5CD1A6]
http://linked.open...okalizaceVysledku	Přírodovědecká fakulta UK
http://linked.open...in/vavai/riv/obor	JC
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	2 (xsd:int)
http://linked.open...vavai/riv/projekt	Centre for Applied Cybernetics
http://linked.open...UplatneniVysledku	2010
http://linked.open...echnickeParametry	DVD + doprovodný text
http://linked.open...iv/tvurceVysledku	Kovář, Bohumil Schier, Jan
http://linked.open...avai/riv/vlastnik	ÚTIA AV ČR, v.v
http://linked.open...itiJinymSubjektem	N - Nabytí licence není nutné (výsledek není licencován)
http://linked.open...n/vavai/riv/zamer	Pokročilé matematické metody získávání, zpracování a využití informací a znalostí ve složitých a nedeterministických systémech

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