About: Application of constrained real-space refinement of flexible molecular fragments to automatic model building of RNA structures

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About: Application of constrained real-space refinement of flexible molecular fragments to automatic model building of RNA structures Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	New methods have been developed for locating phosphate groups and nucleic acid bases in the electron density of RNA structures. These methods utilize a constrained real-space refinement of molecular fragments and a phased rotation-conformation-translation function. Real-space refinement has also contributed to the improvement of the bone/base method of RNA model building and to redesigning the method of building double helices in nucleic acid structures. This improvement is reflected in the increased accuracy of the model building and the ability to better distinguish between correct and false solutions. A program, RSR, was created, and the programs NUT, HEL and DHL were upgraded and organized into a program system, which is CCP4 oriented. Source codes will also be released. New methods have been developed for locating phosphate groups and nucleic acid bases in the electron density of RNA structures. These methods utilize a constrained real-space refinement of molecular fragments and a phased rotation-conformation-translation function. Real-space refinement has also contributed to the improvement of the bone/base method of RNA model building and to redesigning the method of building double helices in nucleic acid structures. This improvement is reflected in the increased accuracy of the model building and the ability to better distinguish between correct and false solutions. A program, RSR, was created, and the programs NUT, HEL and DHL were upgraded and organized into a program system, which is CCP4 oriented. Source codes will also be released. (en)
Title	Application of constrained real-space refinement of flexible molecular fragments to automatic model building of RNA structures Application of constrained real-space refinement of flexible molecular fragments to automatic model building of RNA structures (en)
skos:prefLabel	Application of constrained real-space refinement of flexible molecular fragments to automatic model building of RNA structures Application of constrained real-space refinement of flexible molecular fragments to automatic model building of RNA structures (en)
skos:notation	RIV/62157124:16370/12:43871551!RIV13-MSM-16370___
http://linked.open...avai/riv/aktivita	Z
http://linked.open...avai/riv/aktivity	Z(MSM6215712403)
http://linked.open...iv/cisloPeriodika	2
http://linked.open...vai/riv/dodaniDat	2013
http://linked.open...aciTvurceVysledku	Pavelčík, František
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Veterinární a farmaceutická univerzita Brno / Farmaceutická fakulta
http://linked.open...dnocenehoVysledku	123270
http://linked.open...ai/riv/idVysledku	RIV/62157124:16370/12:43871551
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	CONFORMATION; CRYSTAL-STRUCTURE; MAP INTERPRETATION; MACROMOLECULAR STRUCTURES; PHASED ROTATION; TRANSLATION FUNCTION; ELECTRON-DENSITY; ANGSTROM RESOLUTION; PROTEIN DATA-BANK; TORSION-ANGLE SPACE (en)
http://linked.open.../riv/klicoveSlovo	CRYSTAL-STRUCTURE ANGSTROM RESOLUTION CONFORMATION ELECTRON-DENSITY MACROMOLECULAR STRUCTURES MAP INTERPRETATION PHASED ROTATION PROTEIN DATA-BANK TORSION-ANGLE SPACE TRANSLATION FUNCTION
http://linked.open...odStatuVydavatele	GB - Spojené království Velké Británie a Severního Irska
http://linked.open...ontrolniKodProRIV	[783C0C771E26]
http://linked.open...i/riv/nazevZdroje	Journal of Applied Crystallography
http://linked.open...in/vavai/riv/obor	FR
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	1 (xsd:int)
http://linked.open...UplatneniVysledku	2012
http://linked.open...v/svazekPeriodika	45
http://linked.open...iv/tvurceVysledku	Pavelčík, František
http://linked.open...ain/vavai/riv/wos	000302808300019
http://linked.open...n/vavai/riv/zamer	Active creation of health, yield and performance of the large animals
issn	0021-8898
number of pages	7 (xsd:int)
http://bibframe.org/vocab/doi	10.1107/S0021889812007546
http://localhost/t...ganizacniJednotka	16370

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