About: Genetic Diversity Assessment in Amaranth Germplasm using AFLP and ISSR Markers

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
rdfs:seeAlso	http://www.tandfonline.com/doi/abs/10.1080/15427528.2014.921262
Description	The genetic potential of and relationships among amaranth (Amaranthus spp.) genotypes conserved in gene banks are generally unknown. In this study, nine amplified fragment length polymorphism (AFLP) and 14 inter simple sequence repeats (ISSR) primers were used to study genetic diversity among amaranth species. A total of 92 ISSR loci, of which 86 were polymorphic, were detected. The bands ranged from 300 bp to 2000 bp with polymorphic information content (PIC) of 047. The AFLP primer combinations revealed a total of 648 bands, with 489 as the number of polymorphic loci. The fragments ranged from 52 bp to 423 bp in length with PIC of 0.48. The correlation between genetic similarity based on ISSR and AFLP was 0.77: thus, 59% of the relationship was explained. The cluster analysis revealed distinct groups of amaranth genotypes. Therefore, the use of molecular markers would be valuable for effective utilization of amaranth in breeding programs. The genetic potential of and relationships among amaranth (Amaranthus spp.) genotypes conserved in gene banks are generally unknown. In this study, nine amplified fragment length polymorphism (AFLP) and 14 inter simple sequence repeats (ISSR) primers were used to study genetic diversity among amaranth species. A total of 92 ISSR loci, of which 86 were polymorphic, were detected. The bands ranged from 300 bp to 2000 bp with polymorphic information content (PIC) of 047. The AFLP primer combinations revealed a total of 648 bands, with 489 as the number of polymorphic loci. The fragments ranged from 52 bp to 423 bp in length with PIC of 0.48. The correlation between genetic similarity based on ISSR and AFLP was 0.77: thus, 59% of the relationship was explained. The cluster analysis revealed distinct groups of amaranth genotypes. Therefore, the use of molecular markers would be valuable for effective utilization of amaranth in breeding programs. (en)
Title	Genetic Diversity Assessment in Amaranth Germplasm using AFLP and ISSR Markers Genetic Diversity Assessment in Amaranth Germplasm using AFLP and ISSR Markers (en)
skos:prefLabel	Genetic Diversity Assessment in Amaranth Germplasm using AFLP and ISSR Markers Genetic Diversity Assessment in Amaranth Germplasm using AFLP and ISSR Markers (en)
skos:notation	RIV/62156489:43510/14:00231398!RIV15-MSM-43510___
http://linked.open...avai/riv/aktivita	N
http://linked.open...avai/riv/aktivity	N
http://linked.open...iv/cisloPeriodika	4
http://linked.open...vai/riv/dodaniDat	2015
http://linked.open...aciTvurceVysledku	Baránek, Miroslav Čechová, Jana
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Mendelova univerzita v Brně / Zahradnická fakulta (Lednice)
http://linked.open...dnocenehoVysledku	18093
http://linked.open...ai/riv/idVysledku	RIV/62156489:43510/14:00231398
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	DNA polymorphism; Amaranthus spp.; molecular marker; genetic similarity (en)
http://linked.open.../riv/klicoveSlovo	Amaranthus spp. DNA polymorphism molecular marker genetic similarity
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[BEA57FEA6033]
http://linked.open...i/riv/nazevZdroje	Journal of Crop Improvement
http://linked.open...in/vavai/riv/obor	GE
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	6 (xsd:int)
http://linked.open...UplatneniVysledku	2014
http://linked.open...v/svazekPeriodika	28
http://linked.open...iv/tvurceVysledku	Baránek, Miroslav Čechová, Jana Isaac, Daniel Oduwaye, Oluwasegun Ojo, David Popoola, Akinola
issn	1542-7528
number of pages	12 (xsd:int)
http://bibframe.org/vocab/doi	10.1080/15427528.2014.921262
http://localhost/t...ganizacniJednotka	43510

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