About: Comparative analysis of genetic diversity in Prunus L. as revealed by RAPD and SSR markers     Goto   Sponge   NotDistinct   Permalink

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  • RAPD and SSR markers were used for genetic diversity evaluations among 15 genotypes selected from the genus Prunus L. Altogether 40 RAPD primers and 21 primer pairs designated for microsatellite loci were applied on the whole group of genotypes. The RAPD primers and SSR loci with the highest degree of observed polymorphism were selected. Three approaches were used to generate DNA-based genetic markers--RAPD, SSR with separations on PAGE, SSR with separations on MetaPhor agarose. An analysis of each approach was statistically summarized and the obtained parameters were compared. On the basis of the data obtained by individual methods, the relevant dendrograms of genetic similarities among genotypes were constructed. The Mantel tests between individual similarity matrices showed a statistically significant correlation between the RAPD- and SSR-based similarities if computed for the whole group of analyzed genotypes. Correlations hugely decrease in the case of a parallel analysis of a low-diversit
  • RAPD and SSR markers were used for genetic diversity evaluations among 15 genotypes selected from the genus Prunus L. Altogether 40 RAPD primers and 21 primer pairs designated for microsatellite loci were applied on the whole group of genotypes. The RAPD primers and SSR loci with the highest degree of observed polymorphism were selected. Three approaches were used to generate DNA-based genetic markers--RAPD, SSR with separations on PAGE, SSR with separations on MetaPhor agarose. An analysis of each approach was statistically summarized and the obtained parameters were compared. On the basis of the data obtained by individual methods, the relevant dendrograms of genetic similarities among genotypes were constructed. The Mantel tests between individual similarity matrices showed a statistically significant correlation between the RAPD- and SSR-based similarities if computed for the whole group of analyzed genotypes. Correlations hugely decrease in the case of a parallel analysis of a low-diversit (en)
  • Pro analýzu genetické diverzity bylo použito celkem 40 RAPD a 21 SSR markerů. Byly vybrány RAPD primery poskytující nejvyšší máru polymorfizmu. Genetické markery byly připraveny pomocí tří přístupů - RAPD, SSR při separaci na agaróze Metaphor a SSR při separaci na polakrylamidovém gelu. Byly porovnány výsledky získané na základě aplikace těchto tří přístupů. Vzhled dendrogramu genetické podobnosti se teoretickým předpokaldů nejvíce blížil v případě RAPD metody. (cs)
Title
  • Comparative analysis of genetic diversity in Prunus L. as revealed by RAPD and SSR markers
  • Analýza genetické diverzity v rámci vybraných genotypů rodu Prunus pomocí metod RAPD a SSR (cs)
  • Comparative analysis of genetic diversity in Prunus L. as revealed by RAPD and SSR markers (en)
skos:prefLabel
  • Comparative analysis of genetic diversity in Prunus L. as revealed by RAPD and SSR markers
  • Analýza genetické diverzity v rámci vybraných genotypů rodu Prunus pomocí metod RAPD a SSR (cs)
  • Comparative analysis of genetic diversity in Prunus L. as revealed by RAPD and SSR markers (en)
skos:notation
  • RIV/62156489:43510/06:00092407!RIV07-MSM-43510___
http://linked.open.../vavai/riv/strany
  • 253;259
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • Z(MSM 435100002)
http://linked.open...iv/cisloPeriodika
  • 3
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 469178
http://linked.open...ai/riv/idVysledku
  • RIV/62156489:43510/06:00092407
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Genetic diversity; Mantel test; MetaPhor; Prunus; RAPD; SSR (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • NL - Nizozemsko
http://linked.open...ontrolniKodProRIV
  • [00506806A149]
http://linked.open...i/riv/nazevZdroje
  • Scientia Horticulturae
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • 108
http://linked.open...iv/tvurceVysledku
  • Pidra, Miroslav
  • Raddová, Jana
  • Baránek, Miroslav
http://linked.open...n/vavai/riv/zamer
issn
  • 0304-4238
number of pages
http://localhost/t...ganizacniJednotka
  • 43510
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