About: Study of genetic variability of triticale varieties by SSR markers

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Study of genetic variability of triticale varieties by SSR markers Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
rdfs:seeAlso	http://www.jmbfs.org/wp-content/uploads/2013/04/jmbfs_0369_ondrouskova.pdf
Description	For the detection of genetic variability ten genotypes of winter triticale (x Triticosecale Wittmack, 2n = 6x = 42; BBAARR) were selected: nine varieties and one breeding line with good bread-making quality KM 4-09 with the chromosome translocation 1R.1D 5+10-2. 25 microsatellites markers located in the genome A, B, D and R were chosen for analysis. Eighty-four alleles were detected with an average of 3.36 alleles per locus were detected. For each microsatellite statistical values were calculated diversity index (DI), probabilities of identity (PI) and polymorphic information content (PIC) were calculated and averages statistical values are: DI 0.55, PI 0.27 and 0.5 PIC. Overall dendrogram based on the UPGMA method (Jaccards similarity coefficient) significantly distinguished two groups of genotypes and these groups were divided into sub-clusters. A set of 5 SSR markers (Xwms0752, Xbarc128, Xrems1237, Xwms0861 and Xbarc170) which have the calculated PIC value higher than 0.68 that are sufficient for the identification of the analyzed genotypes was described. For the detection of genetic variability ten genotypes of winter triticale (x Triticosecale Wittmack, 2n = 6x = 42; BBAARR) were selected: nine varieties and one breeding line with good bread-making quality KM 4-09 with the chromosome translocation 1R.1D 5+10-2. 25 microsatellites markers located in the genome A, B, D and R were chosen for analysis. Eighty-four alleles were detected with an average of 3.36 alleles per locus were detected. For each microsatellite statistical values were calculated diversity index (DI), probabilities of identity (PI) and polymorphic information content (PIC) were calculated and averages statistical values are: DI 0.55, PI 0.27 and 0.5 PIC. Overall dendrogram based on the UPGMA method (Jaccards similarity coefficient) significantly distinguished two groups of genotypes and these groups were divided into sub-clusters. A set of 5 SSR markers (Xwms0752, Xbarc128, Xrems1237, Xwms0861 and Xbarc170) which have the calculated PIC value higher than 0.68 that are sufficient for the identification of the analyzed genotypes was described. (en)
Title	Study of genetic variability of triticale varieties by SSR markers Study of genetic variability of triticale varieties by SSR markers (en)
skos:prefLabel	Study of genetic variability of triticale varieties by SSR markers Study of genetic variability of triticale varieties by SSR markers (en)
skos:notation	RIV/62156489:43210/13:00199403!RIV14-GA0-43210___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(GD204/09/H002)
http://linked.open...iv/cisloPeriodika	5
http://linked.open...vai/riv/dodaniDat	2014
http://linked.open...aciTvurceVysledku	Vyhnánek, Tomáš Ondroušková, Jana
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Mendelova univerzita v Brně / Agronomická fakulta
http://linked.open...dnocenehoVysledku	108705
http://linked.open...ai/riv/idVysledku	RIV/62156489:43210/13:00199403
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	SSR; microsatellites; xTriticosecale Wittmack; triticale; genetic variability (en)
http://linked.open.../riv/klicoveSlovo	SSR xTriticosecale Wittmack microsatellites genetic variability triticale
http://linked.open...odStatuVydavatele	SK - Slovenská republika
http://linked.open...ontrolniKodProRIV	[1116771D51BB]
http://linked.open...i/riv/nazevZdroje	The Journal of Microbiology, Biotechnology and Food Sciences
http://linked.open...in/vavai/riv/obor	EB
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	2 (xsd:int)
http://linked.open...vavai/riv/projekt	Plant Developmental Biology and Genetics
http://linked.open...UplatneniVysledku	2013
http://linked.open...v/svazekPeriodika	2
http://linked.open...iv/tvurceVysledku	Ondroušková, Jana Vyhnánek, Tomáš
issn	1338-5178
number of pages	3 (xsd:int)
http://localhost/t...ganizacniJednotka	43210

Faceted Search & Find service v1.16.118 as of Jun 21 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 36 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software