About: MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels

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About: MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Biomolecular channels play important roles in many biological systems, e.g. enzymes, ribosomes and ion channels. This article introduces a web-based interactive MOLEonline 2.0 application for the analysis of access/egress paths to interior molecular voids. MOLEonline 2.0 enables platform-independent, easy-to-use and interactive analyses of (bio)macromolecular channels, tunnels and pores. Results are presented in a clear manner, making their interpretation easy. For each channel, MOLEonline displays a 3D graphical representation of the channel, its profile accompanied by a list of lining residues and also its basic physicochemical properties. The users can tune advanced parameters when performing a channel search to direct the search according to their needs. The MOLEonline 2.0 application is freely available via the Internet at http://ncbr.muni.cz/mole or http://mole.upol.cz. Biomolecular channels play important roles in many biological systems, e.g. enzymes, ribosomes and ion channels. This article introduces a web-based interactive MOLEonline 2.0 application for the analysis of access/egress paths to interior molecular voids. MOLEonline 2.0 enables platform-independent, easy-to-use and interactive analyses of (bio)macromolecular channels, tunnels and pores. Results are presented in a clear manner, making their interpretation easy. For each channel, MOLEonline displays a 3D graphical representation of the channel, its profile accompanied by a list of lining residues and also its basic physicochemical properties. The users can tune advanced parameters when performing a channel search to direct the search according to their needs. The MOLEonline 2.0 application is freely available via the Internet at http://ncbr.muni.cz/mole or http://mole.upol.cz. (en)
Title	MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels (en)
skos:prefLabel	MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels MOLEonline 2.0: Interactive Web-based Analysis of Biomacromolecular Channels (en)
skos:notation	RIV/61989592:15310/12:33142298!RIV13-MSM-15310___
http://linked.open...avai/riv/aktivita	P S
http://linked.open...avai/riv/aktivity	P(ED1.1.00/02.0068), P(ED2.1.00/03.0058), P(EE2.3.20.0017), P(GA303/09/1001), P(GBP208/12/G016), P(GD301/09/H004), P(GPP303/12/P019), P(ME08008), S
http://linked.open...iv/cisloPeriodika	W1
http://linked.open...vai/riv/dodaniDat	2013
http://linked.open...aciTvurceVysledku	Otyepka, Michal Berka, Karel Banáš, Pavel Hanák, Ondřej Navrátilová, Veronika
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Univerzita Palackého v Olomouci / Přírodovědecká fakulta
http://linked.open...dnocenehoVysledku	151571
http://linked.open...ai/riv/idVysledku	RIV/61989592:15310/12:33142298
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	macromolecules; tunnels; identification; active-sites; photosystem-II; potassium channel; substrate preferences; nucleic-acids; protein structures; cytochromes P450 (en)
http://linked.open.../riv/klicoveSlovo	identification tunnels nucleic-acids protein structures cytochromes P450 active-sites macromolecules photosystem-II potassium channel substrate preferences
http://linked.open...odStatuVydavatele	GB - Spojené království Velké Británie a Severního Irska
http://linked.open...ontrolniKodProRIV	[DE482DE50064]
http://linked.open...i/riv/nazevZdroje	Nucleic Acids Research
http://linked.open...in/vavai/riv/obor	CF
http://linked.open...ichTvurcuVysledku	5 (xsd:int)
http://linked.open...cetTvurcuVysledku	10 (xsd:int)
http://linked.open...vavai/riv/projekt	Structural Determinants of Substrate Specificity of Human Cytochromes P450 Controlling structure and function of biomolecules at the molecular scale: theory meets experiment Central european institute of technology Regional Centre of Advanced Technologies and Materials Molecular and structural biology of selected antitumor drugs. From mechanistic studies to chemotherapy of tumors Research team development of the Regional Centre of Advanced Technologies and Materials Design of Carbohydrates and Glycomimetics as Antibacterial and Antiviral Drugs Mechanism of ligand access/egress to/from active site of microsomal drug-metabolising cytochromes P450
http://linked.open...UplatneniVysledku	2012
http://linked.open...v/svazekPeriodika	40
http://linked.open...iv/tvurceVysledku	Koča, Jaroslav Otyepka, Michal Berka, Karel Ionescu, Crina-Maria Sehnal, David Svobodová Vařeková, Radka Banáš, Pavel Navrátilová, Veronika Hanák, Ondřej Jaiswal, Deepti
http://linked.open...ain/vavai/riv/wos	000306670900036
issn	0305-1048
number of pages	6 (xsd:int)
http://bibframe.org/vocab/doi	10.1093/nar/gks363
http://localhost/t...ganizacniJednotka	15310

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