About: Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates. (cs) The entire nucleotide sequence for the coding regions of a Danish PMTV isolate 54-15 was determined and compared to other known and sequenced isolates of PMTV. Many nucleotide and amino acid changes were found in parts of RNA coding for the triple gene block (TGB) proteins and in the part of the RNA coding for the read-through region of the coat protein (CP). These regions for two other isolates, the mild one 54-10 and the severe one 54-19, were sequenced. Only two amino acid changes were found to correlate with the subdivision of isolates according to symptom development into mild and severe subgroups. In addition, the phylogenetic tree was obtained suggesting the closest relationship between isolates 54-15 and 54-10. Although the sequence comparisons indicate a high genetic stability of PMTV populations, a surprising change was found in the newly sequenced isolates ů the replacement of the AUG start codon of the fourth gene of the TGB encoding RNA, coding for a cystein-rich protei... The entire nucleotide sequence for the coding regions of a Danish PMTV isolate 54-15 was determined and compared to other known and sequenced isolates of PMTV. Many nucleotide and amino acid changes were found in parts of RNA coding for the triple gene block (TGB) proteins and in the part of the RNA coding for the read-through region of the coat protein (CP). These regions for two other isolates, the mild one 54-10 and the severe one 54-19, were sequenced. Only two amino acid changes were found to correlate with the subdivision of isolates according to symptom development into mild and severe subgroups. In addition, the phylogenetic tree was obtained suggesting the closest relationship between isolates 54-15 and 54-10. Although the sequence comparisons indicate a high genetic stability of PMTV populations, a surprising change was found in the newly sequenced isolates ů the replacement of the AUG start codon of the fourth gene of the TGB encoding RNA, coding for a cystein-rich protei... (en)
Title	Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates (en) Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates (cs)
skos:prefLabel	Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates (en) Extended Sequence Analysis of Three Danish Potato Mop-Top Virus (PMTV) Isolates (cs)
skos:notation	RIV/61389030:_____/04:00107472!RIV/2005/AV0/A56005/N
http://linked.open.../vavai/riv/strany	249;255
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GA522/01/1121), P(GA522/04/1329), Z(AV0Z5038910)
http://linked.open...iv/cisloPeriodika	2
http://linked.open...vai/riv/dodaniDat	2005
http://linked.open...aciTvurceVysledku	Filigarová, Marie Ryparová, Pavla Čeřovská, Noemi Moravec, Tomáš Pečenková, Tamara
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Ústav experimentální botaniky AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	563945
http://linked.open...ai/riv/idVysledku	RIV/61389030:_____/04:00107472
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	Cystein-rich protein; genome comparison; nucleotide sequence (en)
http://linked.open.../riv/klicoveSlovo	nucleotide sequence Cystein-rich protein genome comparison
http://linked.open...odStatuVydavatele	NL - Nizozemsko
http://linked.open...ontrolniKodProRIV	[03886F974F34]
http://linked.open...i/riv/nazevZdroje	Virus Genes
http://linked.open...in/vavai/riv/obor	EE
http://linked.open...ichTvurcuVysledku	5 (xsd:int)
http://linked.open...cetTvurcuVysledku	5 (xsd:int)
http://linked.open...vavai/riv/projekt	Identification of potato mop-top virus (PMTV) based on the detection of virus proteins Molecular biological characterisation, detection and functional analysis of potato mop-top virus (PMTV)
http://linked.open...UplatneniVysledku	2004
http://linked.open...v/svazekPeriodika	29
http://linked.open...iv/tvurceVysledku	Moravec, Tomáš Čeřovská, Noemi Pečenková, Tamara Filigarová, Marie Rosecká, Pavla
http://linked.open...n/vavai/riv/zamer	Physiological and genetical bases of plant development, cell cycle, morphogenesis, stress reactions and biotechnologies. Genome organisation and function
issn	0920-8569
number of pages	7 (xsd:int)

Faceted Search & Find service v1.16.118 as of Jun 21 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 77 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software