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  • The stabilisation energies of five ionic and neutral organic crystal structures containing various halogen bonds (I...I, Br...Br, I...Br, I...S and Br...S) were calculated using the DFT-D3 method (B97D/def2-QZVP). Besides them, the ionic I-3(-)...I-2 and neutral I-2...I-2, complexes (in the crystal geometries) were also studied. The nature of the bonds was deduced from the electrostatic potential evaluated for all subsystems. In almost all the cases, the sigma-hole was positive; it was negative only for the ionic I-3(-) system (although more positive than the respective belt value). The strongest halogen bonds were those that involved iodine as a halogen-bond donor and acceptor. Among ionic X...I-3(-) and neutral X...I-2 and X...Y dimers, the neutral X...I-2 complexes were, surprisingly enough, the most stable; the highest stabilisation energy of 13.8 kcal mol(-1) was found for the I-2...1,3-dithiole-2-thione-4-carboxylic acid complex. The stabilisation energies of the ionic I-3(-)...I-2 and neutral I-2...1,3-dithiole-2-thione-4-carboxylic acid (20.2 and 20.42 kcal mol(-1), respectively) complexes are very high, which is explained by the favourable geometrical arrangement, allowing the formation of a strong halogen bond. An I...I halogen bond also exists in the neutral I-2...I-2 complex, having only moderate stabilisation energy (3.9 kcal mol(-1)). This stabilisation energy was, however, shown to be close to that in the optimal gas-phase L-shaped I-2...I-2 complex. In all the cases, the dispersion energy is important and comparable to electrostatic energy. Only in strong halogen bonds (e.g. I-3(-)...I-2), the electrostatic energy becomes dominant.
  • The stabilisation energies of five ionic and neutral organic crystal structures containing various halogen bonds (I...I, Br...Br, I...Br, I...S and Br...S) were calculated using the DFT-D3 method (B97D/def2-QZVP). Besides them, the ionic I-3(-)...I-2 and neutral I-2...I-2, complexes (in the crystal geometries) were also studied. The nature of the bonds was deduced from the electrostatic potential evaluated for all subsystems. In almost all the cases, the sigma-hole was positive; it was negative only for the ionic I-3(-) system (although more positive than the respective belt value). The strongest halogen bonds were those that involved iodine as a halogen-bond donor and acceptor. Among ionic X...I-3(-) and neutral X...I-2 and X...Y dimers, the neutral X...I-2 complexes were, surprisingly enough, the most stable; the highest stabilisation energy of 13.8 kcal mol(-1) was found for the I-2...1,3-dithiole-2-thione-4-carboxylic acid complex. The stabilisation energies of the ionic I-3(-)...I-2 and neutral I-2...1,3-dithiole-2-thione-4-carboxylic acid (20.2 and 20.42 kcal mol(-1), respectively) complexes are very high, which is explained by the favourable geometrical arrangement, allowing the formation of a strong halogen bond. An I...I halogen bond also exists in the neutral I-2...I-2 complex, having only moderate stabilisation energy (3.9 kcal mol(-1)). This stabilisation energy was, however, shown to be close to that in the optimal gas-phase L-shaped I-2...I-2 complex. In all the cases, the dispersion energy is important and comparable to electrostatic energy. Only in strong halogen bonds (e.g. I-3(-)...I-2), the electrostatic energy becomes dominant. (en)
Title
  • Halogen bonds in crystal TTF derivatives: an ab initio quantum mechanical study
  • Halogen bonds in crystal TTF derivatives: an ab initio quantum mechanical study (en)
skos:prefLabel
  • Halogen bonds in crystal TTF derivatives: an ab initio quantum mechanical study
  • Halogen bonds in crystal TTF derivatives: an ab initio quantum mechanical study (en)
skos:notation
  • RIV/61388963:_____/14:00427593!RIV15-GA0-61388963
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • I, P(ED2.1.00/03.0058), P(GBP208/12/G016)
http://linked.open...iv/cisloPeriodika
  • 5
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 18736
http://linked.open...ai/riv/idVysledku
  • RIV/61388963:_____/14:00427593
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • hydrogen-bonds; noncovalent interactions; sigma-hole (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • GB - Spojené království Velké Británie a Severního Irska
http://linked.open...ontrolniKodProRIV
  • [B0BB8F4B7E1C]
http://linked.open...i/riv/nazevZdroje
  • Physical Chemistry Chemical Physics
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • 16
http://linked.open...iv/tvurceVysledku
  • Hobza, Pavel
  • Deepa, Palanisamy
  • Kolandaivel, P.
  • Pandiyan, B. V.
http://linked.open...ain/vavai/riv/wos
  • 000329175700031
issn
  • 1463-9076
number of pages
http://bibframe.org/vocab/doi
  • 10.1039/c3cp53976h
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