About: Another role of proline: stabilization interactions in proteins and protein complexes concerning proline and tryptophane

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Proline–tryptophan complexes derived from experimental structures are investigated by quantum chemical procedures known to properly describe the London dispersion energy. To elucidate the structural features responsible for this unexpectedly large stabilization we examined the role of the nitrogen heteroatom and the importance of the cyclicity of the proline residue. We show that the electrostatic interaction due to the presence of the dipole, caused by the nitrogen heteroatom, contributes largely to the strength of the interaction. Proline–tryptophan complexes derived from experimental structures are investigated by quantum chemical procedures known to properly describe the London dispersion energy. To elucidate the structural features responsible for this unexpectedly large stabilization we examined the role of the nitrogen heteroatom and the importance of the cyclicity of the proline residue. We show that the electrostatic interaction due to the presence of the dipole, caused by the nitrogen heteroatom, contributes largely to the strength of the interaction. (en) Komplex tryptophane a prolinu získaný z experimentálních struktur byl zkoumán procedurami kvantové chemie schopnými popsat Londonovu disperzní energii. Pro potvrzení strukturálních a energetických rysů zodpovědných za tuto extrémní stabilizaci byla studována role dusíkového heteroatomu a cyklizace sturkury. Ukazujeme, že elektrostatické interakce způsobené dipólovým momentem dusíku přispívají nejvíce k této stabilizaci. (cs)
Title	Another role of proline: stabilization interactions in proteins and protein complexes concerning proline and tryptophane Another role of proline: stabilization interactions in proteins and protein complexes concerning proline and tryptophane (en) Jiná úloha prolinu: stabilizační nterakce v proteinech a proteinových komlexech zahrnující prolin a tryptophane (cs)
skos:prefLabel	Another role of proline: stabilization interactions in proteins and protein complexes concerning proline and tryptophane Another role of proline: stabilization interactions in proteins and protein complexes concerning proline and tryptophane (en) Jiná úloha prolinu: stabilizační nterakce v proteinech a proteinových komlexech zahrnující prolin a tryptophane (cs)
skos:notation	RIV/61388963:_____/08:00314772!RIV09-AV0-61388963
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GA203/06/1727), P(GD203/05/H001), P(IAA400550510), P(LC512), Z(AV0Z40550506), Z(AV0Z50520701)
http://linked.open...iv/cisloPeriodika	42
http://linked.open...vai/riv/dodaniDat	2009
http://linked.open...aciTvurceVysledku	Biedermannová, Lada Vondrášek, Jiří Hobza, Pavel Berka, Karel Riley, Kevin Eugene
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Ústav organické chemie a biochemie AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	356358
http://linked.open...ai/riv/idVysledku	RIV/61388963:_____/08:00314772
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	proline; stabilization interaction; an-initio methods (en)
http://linked.open.../riv/klicoveSlovo	proline an-initio methods stabilization interaction
http://linked.open...odStatuVydavatele	GB - Spojené království Velké Británie a Severního Irska
http://linked.open...ontrolniKodProRIV	[823B318DEDF0]
http://linked.open...i/riv/nazevZdroje	Physical Chemistry Chemical Physics
http://linked.open...in/vavai/riv/obor	CF
http://linked.open...ichTvurcuVysledku	5 (xsd:int)
http://linked.open...cetTvurcuVysledku	5 (xsd:int)
http://linked.open...vavai/riv/projekt	Center for biomolecules and complex molecular systems Experimental Study and Computer Modeling of the Structure and Function of the Complex Molecular Systems and Bio(macro)molecules Experimental and computational analysis of hydrophobic clusters in thermophilic proteins Accurate calculations of stabilization energies of stacking and hydrogen bonding: nucleic acid bases and proteins
http://linked.open...UplatneniVysledku	2008
http://linked.open...v/svazekPeriodika	10
http://linked.open...iv/tvurceVysledku	Hobza, Pavel Riley, Kevin Eugene Vondrášek, Jiří Berka, Karel Bendová, Lada
http://linked.open...ain/vavai/riv/wos	000260485600002
http://linked.open...n/vavai/riv/zamer	Regulace biologických procesů: Chemické modulátory vybraných systémů významných pro medicínu a zemědělství Establishing of the Biotechnology Institute ASCR
issn	1463-9076
number of pages	10 (xsd:int)

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