About: Plasmid pA81 from chlorobenzoate degrading strain Achromobacter xylosoxidans A8

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About: Plasmid pA81 from chlorobenzoate degrading strain Achromobacter xylosoxidans A8 Goto Sponge NotDistinct Permalink

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	The Achromobacter xylosoxidans strain A8 was isolated in the Czech Republic from PCB contaminated soil. It is able to use 2-clorobenzoate (2-CB) and 2,5-dichlorobenzoate (2,5-DCB) as sole sources of carbon and energy. We analyze the A. xylosoxidans A8 with the aim to characterize genes involved in the degradation of CBs.The genome of this strain contains two large conjugative plasmids pA81 (~ 100 kbp) and pA82 (~ 250 kbp). The genes encoding enzymes involved in the degradation pathway were found to be situated directly on the plasmid pA81. On the basis of the pA81 sequence analysis we identified clusters responsible for the plasmid replication, conjugative transfer, stable inheritance, degradation of xenobiotics and transposition. Comparison of the plasmid %22backbone%22 constituted by regions of replication control and stability and two Tra1/Tra2 regions responsible for conjugative transfer shows the highest similarity to the backbone of IncPß plasmids. Members of this plasmid group can replica The Achromobacter xylosoxidans strain A8 was isolated in the Czech Republic from PCB contaminated soil. It is able to use 2-clorobenzoate (2-CB) and 2,5-dichlorobenzoate (2,5-DCB) as sole sources of carbon and energy. We analyze the A. xylosoxidans A8 with the aim to characterize genes involved in the degradation of CBs.The genome of this strain contains two large conjugative plasmids pA81 (~ 100 kbp) and pA82 (~ 250 kbp). The genes encoding enzymes involved in the degradation pathway were found to be situated directly on the plasmid pA81. On the basis of the pA81 sequence analysis we identified clusters responsible for the plasmid replication, conjugative transfer, stable inheritance, degradation of xenobiotics and transposition. Comparison of the plasmid %22backbone%22 constituted by regions of replication control and stability and two Tra1/Tra2 regions responsible for conjugative transfer shows the highest similarity to the backbone of IncPß plasmids. Members of this plasmid group can replica (en) Plasmid pA81 z kmene Achromobacter xylosoxidans A8, který degraduje chlorbenzoaty (cs)
Title	Plasmid pA81 from chlorobenzoate degrading strain Achromobacter xylosoxidans A8 Plasmid pA81 from chlorobenzoate degrading strain Achromobacter xylosoxidans A8 (en) Plasmid pA81 z kmene Achromobacter xylosoxidans A8, který degraduje chlorbenzoáty (cs)
skos:prefLabel	Plasmid pA81 from chlorobenzoate degrading strain Achromobacter xylosoxidans A8 Plasmid pA81 from chlorobenzoate degrading strain Achromobacter xylosoxidans A8 (en) Plasmid pA81 z kmene Achromobacter xylosoxidans A8, který degraduje chlorbenzoáty (cs)
skos:notation	RIV/60461373:22330/04:00012857!RIV/2005/MSM/223305/N
http://linked.open.../vavai/riv/strany	228
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(LN00A079)
http://linked.open...vai/riv/dodaniDat	2005
http://linked.open...aciTvurceVysledku	Jenčová, Věra Strnad, Hynek Pačes, Václav Chodora, Zdeněk
http://linked.open.../riv/druhVysledku	D - Článek ve sborníku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Vysoká škola chemicko-technologická v Praze / Fakulta potravinářské a biochemické technologie
http://linked.open...dnocenehoVysledku	579700
http://linked.open...ai/riv/idVysledku	RIV/60461373:22330/04:00012857
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	plasmid pA81 (en)
http://linked.open.../riv/klicoveSlovo	plasmid pA81
http://linked.open...ontrolniKodProRIV	[E0E4F5B01453]
http://linked.open...v/mistoKonaniAkce	Olomouc
http://linked.open...i/riv/mistoVydani	Olomouc
http://linked.open...i/riv/nazevZdroje	Proceedings of the XIX. meeting of czech and slovak societies for biochemistry and molecula r biology
http://linked.open...in/vavai/riv/obor	EE
http://linked.open...ichTvurcuVysledku	4 (xsd:int)
http://linked.open...cetTvurcuVysledku	4 (xsd:int)
http://linked.open...vavai/riv/projekt	Center of Integrated Genomics
http://linked.open...UplatneniVysledku	2004
http://linked.open...iv/tvurceVysledku	Pačes, Václav Strnad, Hynek Jenčová, Věra Chodora, Zdeněk
http://linked.open...vavai/riv/typAkce	WRD - Světová
http://linked.open.../riv/zahajeniAkce	2004-01-01 (xsd:date)
issn	0232-0061
number of pages	1 (xsd:int)
http://purl.org/ne...btex#hasPublisher	Univerzita Palackého v Olomouci
http://localhost/t...ganizacniJednotka	22330

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