About: Extensive functional pleiotropy of REVOLUTA substantiated through forward genetics

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	In plants, genes may sustain extensive pleiotropic functional properties by individually affecting multiple, distinct traits. We discuss results from three genome-wide association studies of ca. 400 natural Populus trichocarpa (poplar; black cottonwood) accessions phenotyped for 60 ecological/biomass, wood quality and rust fungus resistance traits. Single nucleotide polymorphisms (SNPs) in the poplar ortholog of the Class III homeodomain-leucine zipper (HD ZIP) transcription factor gene REVOLUTA (popREV) were significantly associated with three specific traits. Based on SNP associations with fungal resistance, leaf drop, and cellulose content, the popREV gene contains three potential regulatory sites within non-coding regions at the gene’s 3’end where alternative splicing and messenger RNA (mRNA) processing actively occurs. The polymorphisms in this region associated with leaf abscission and cellulose content are suggested to represent more recent variants, whereas the SNP associated with leaf ru In plants, genes may sustain extensive pleiotropic functional properties by individually affecting multiple, distinct traits. We discuss results from three genome-wide association studies of ca. 400 natural Populus trichocarpa (poplar; black cottonwood) accessions phenotyped for 60 ecological/biomass, wood quality and rust fungus resistance traits. Single nucleotide polymorphisms (SNPs) in the poplar ortholog of the Class III homeodomain-leucine zipper (HD ZIP) transcription factor gene REVOLUTA (popREV) were significantly associated with three specific traits. Based on SNP associations with fungal resistance, leaf drop, and cellulose content, the popREV gene contains three potential regulatory sites within non-coding regions at the gene’s 3’end where alternative splicing and messenger RNA (mRNA) processing actively occurs. The polymorphisms in this region associated with leaf abscission and cellulose content are suggested to represent more recent variants, whereas the SNP associated with leaf ru (en)
Title	Extensive functional pleiotropy of REVOLUTA substantiated through forward genetics Extensive functional pleiotropy of REVOLUTA substantiated through forward genetics (en)
skos:prefLabel	Extensive functional pleiotropy of REVOLUTA substantiated through forward genetics Extensive functional pleiotropy of REVOLUTA substantiated through forward genetics (en)
skos:notation	RIV/60460709:41320/14:62113!RIV15-MSM-41320___
http://linked.open...avai/riv/aktivita	S
http://linked.open...avai/riv/aktivity	S
http://linked.open...iv/cisloPeriodika	2
http://linked.open...vai/riv/dodaniDat	2015
http://linked.open...aciTvurceVysledku	Klápště, Jaroslav
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Česká zemědělská univerzita v Praze / Fakulta lesnická a dřevařská
http://linked.open...dnocenehoVysledku	16200
http://linked.open...ai/riv/idVysledku	RIV/60460709:41320/14:62113
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	pleiotropy, REVOLUTA, association mapping (en)
http://linked.open.../riv/klicoveSlovo	association mapping REVOLUTA pleiotropy
http://linked.open...odStatuVydavatele	CZ - Česká republika
http://linked.open...ontrolniKodProRIV	[1D8DEBFCFDD8]
http://linked.open...i/riv/nazevZdroje	PLANT PHYSIOLOGY
http://linked.open...in/vavai/riv/obor	GK
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	14 (xsd:int)
http://linked.open...UplatneniVysledku	2014
http://linked.open...v/svazekPeriodika	164
http://linked.open...iv/tvurceVysledku	Klápště, Jaroslav El-Kassaby, Yousry Guy, Robert Douglas, Carl Hamelin, Richard La Mantia, Jonathan Mansfield, Shawn Cronk, Quentin Ehlting, Juergen Friedmann, Michael McKown, Athena Porth, Ilga Skyba, Oleksandr Unda, Faride
http://linked.open...ain/vavai/riv/wos	000331132300005
issn	0032-0889
number of pages	7 (xsd:int)
http://localhost/t...ganizacniJednotka	41320

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