About: Comparison of genetic parameters from marker-based relationship, sibship, and combined models in Scots pine multi-site open-pollinated tests

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Nine microsatellite DNA markers (simple sequence repeats, SSRs) were used to estimate pairwise relationships among 597 Scots pine (Pinus sylvestris) trees as well as to generate a sibship structure for quantitative genetic parameters' estimation comparison. The studied trees were part of an open-pollinated progeny test of 102 first-generation parents. Three methods were used to estimate variance components and heritabilities, namely, structured pedigree (half- and full-sib), marker-based pairwise relationships (four pairwise estimators), and a combined pedigree and marker-based relationship. In each of the three methods, the same animal model was used to compute variances except when marker-based relationship was used wherein we substituted the average numerator relationship matrix (i.e., pedigree-based matrix) with that computed based on markers' pairwise relationships. Our results showed a high correlation in estimated breeding values between the pedigree (full-sib) and the combined marker-pedigree Nine microsatellite DNA markers (simple sequence repeats, SSRs) were used to estimate pairwise relationships among 597 Scots pine (Pinus sylvestris) trees as well as to generate a sibship structure for quantitative genetic parameters' estimation comparison. The studied trees were part of an open-pollinated progeny test of 102 first-generation parents. Three methods were used to estimate variance components and heritabilities, namely, structured pedigree (half- and full-sib), marker-based pairwise relationships (four pairwise estimators), and a combined pedigree and marker-based relationship. In each of the three methods, the same animal model was used to compute variances except when marker-based relationship was used wherein we substituted the average numerator relationship matrix (i.e., pedigree-based matrix) with that computed based on markers' pairwise relationships. Our results showed a high correlation in estimated breeding values between the pedigree (full-sib) and the combined marker-pedigree (en)
Title	Comparison of genetic parameters from marker-based relationship, sibship, and combined models in Scots pine multi-site open-pollinated tests Comparison of genetic parameters from marker-based relationship, sibship, and combined models in Scots pine multi-site open-pollinated tests (en)
skos:prefLabel	Comparison of genetic parameters from marker-based relationship, sibship, and combined models in Scots pine multi-site open-pollinated tests Comparison of genetic parameters from marker-based relationship, sibship, and combined models in Scots pine multi-site open-pollinated tests (en)
skos:notation	RIV/60460709:41320/13:60223!RIV14-TA0-41320___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(QH81160), P(QH81172), P(TA01020512)
http://linked.open...iv/cisloPeriodika	5
http://linked.open...vai/riv/dodaniDat	2014
http://linked.open...aciTvurceVysledku	Kobliha, Jaroslav Klápště, Jaroslav Lstibůrek, Milan Korecký, Jiří
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Česká zemědělská univerzita v Praze / Fakulta lesnická a dřevařská
http://linked.open...dnocenehoVysledku	66214
http://linked.open...ai/riv/idVysledku	RIV/60460709:41320/13:60223
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	Marker-based pairwise relationship, Combined pedigree–marker-based relationship, Quantitative genetic parameters, Scots pine (en)
http://linked.open.../riv/klicoveSlovo	Combined pedigree–marker-based relationship Marker-based pairwise relationship Quantitative genetic parameters Scots pine
http://linked.open...odStatuVydavatele	DE - Spolková republika Německo
http://linked.open...ontrolniKodProRIV	[A9AC0A70F2E0]
http://linked.open...i/riv/nazevZdroje	Tree Genetics & Genomes
http://linked.open...in/vavai/riv/obor	GK
http://linked.open...ichTvurcuVysledku	4 (xsd:int)
http://linked.open...cetTvurcuVysledku	6 (xsd:int)
http://linked.open...vavai/riv/projekt	Economic Effectiveness of Forest Tree Breeding Establishment of the second generation seed orchards of Scots pine with the help of genetic markers Utilization of Gene Resources of Forest Tree Species for Biodiversity Conservation and Reforestation by the Military Forests and Estates of the Czech Republic, s. e.
http://linked.open...UplatneniVysledku	2013
http://linked.open...v/svazekPeriodika	9
http://linked.open...iv/tvurceVysledku	Klápště, Jaroslav Kobliha, Jaroslav Lstibůrek, Milan Korecký, Jiří El-Kassaby, Yousry Nelson, C Dana
http://linked.open...ain/vavai/riv/wos	000324514800008
issn	1614-2942
number of pages	9 (xsd:int)
http://localhost/t...ganizacniJednotka	41320

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