About: Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa

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About: Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
rdfs:seeAlso	http://www.plantcell.org/content/early/2013/05/06/tpc.113.110486.abstract
Description	The genus Brassica includes several important agricultural and horticultural crops. Their current genome structures were shaped by whole-genome triplication followed by extensive diploidization. The availability of several crucifer genome sequences, especially that of Chinese cabbage (Brassica rapa), enables study of the evolution of the mesohexaploid Brassica genomes from their diploid progenitors. We reconstructed three ancestral subgenomes of B. rapa (n = 10) by comparing its whole-genome sequence to ancestral and extant Brassicaceae genomes. All three B. rapa paleogenomes apparently consisted of seven chromosomes, similar to the ancestral translocation Proto-Calepineae Karyotype (tPCK; n = 7), which is the evolutionarily younger variant of the Proto-Calepineae Karyotype (n = 7). The genus Brassica includes several important agricultural and horticultural crops. Their current genome structures were shaped by whole-genome triplication followed by extensive diploidization. The availability of several crucifer genome sequences, especially that of Chinese cabbage (Brassica rapa), enables study of the evolution of the mesohexaploid Brassica genomes from their diploid progenitors. We reconstructed three ancestral subgenomes of B. rapa (n = 10) by comparing its whole-genome sequence to ancestral and extant Brassicaceae genomes. All three B. rapa paleogenomes apparently consisted of seven chromosomes, similar to the ancestral translocation Proto-Calepineae Karyotype (tPCK; n = 7), which is the evolutionarily younger variant of the Proto-Calepineae Karyotype (n = 7). (en)
Title	Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa (en)
skos:prefLabel	Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa Deciphering the Diploid Ancestral Genome of the Mesohexaploid Brassica rapa (en)
skos:notation	RIV/00216224:14740/13:00066451!RIV14-MSM-14740___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(ED1.1.00/02.0068), P(GBP501/12/G090)
http://linked.open...iv/cisloPeriodika	5
http://linked.open...vai/riv/dodaniDat	2014
http://linked.open...aciTvurceVysledku	Lysák, Martin Mandáková, Terezie
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Středoevropský technologický institut
http://linked.open...dnocenehoVysledku	68076
http://linked.open...ai/riv/idVysledku	RIV/00216224:14740/13:00066451
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	CHROMOSOME-NUMBER REDUCTION; ARABIDOPSIS-THALIANA; SPECIES BRASSICACEAE; KARYOTYPE EVOLUTION; RAPHANUS-SATIVUS; SEQUENCE; PHYLOGENY; MAP; BLOCKS; RECONSTRUCTION (en)
http://linked.open.../riv/klicoveSlovo	BLOCKS CHROMOSOME-NUMBER REDUCTION KARYOTYPE EVOLUTION RAPHANUS-SATIVUS SPECIES BRASSICACEAE RECONSTRUCTION SEQUENCE MAP ARABIDOPSIS-THALIANA PHYLOGENY
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[13C4DAED46C3]
http://linked.open...i/riv/nazevZdroje	Plant Cell
http://linked.open...in/vavai/riv/obor	EB
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	6 (xsd:int)
http://linked.open...vavai/riv/projekt	Central european institute of technology Evolution and Function of Complex Plant Genomes
http://linked.open...UplatneniVysledku	2013
http://linked.open...v/svazekPeriodika	25
http://linked.open...iv/tvurceVysledku	Lysák, Martin Mandáková, Terezie Wang, Xiaowu Cheng, Feng Wu, Jian Xie, Qi
http://linked.open...ain/vavai/riv/wos	000321035800009
issn	1040-4651
number of pages	14 (xsd:int)
http://bibframe.org/vocab/doi	10.1105/tpc.113.110486
http://localhost/t...ganizacniJednotka	14740

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