About: Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings

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About: Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Molecular recognition of carbohydrates by proteins plays a key role in many biological processes including immune response, pathogen entry into a cell, cell-cell adhesion and so forth. The list of proteins that recognise carbohydrates via aromatic residues include lectins, carbohydrate-binding modules, glycosidases, glycosyl transferases, “greasy slides” of carbohydrate transporters and complimentary sugar-binding sites (“sugar tongs”). Carbohydrates typically interact with aromatic systems in a parallel orientation. In this study we present the first systematic computational three-dimensional scan of carbohydrate hydrophobic patches for the ability to interact via CH/pi dispersion interactions. The carbohydrates b-D-glucopyranose, b-D-mannopyranose and a-L-fucopyranose were studied in a complex with a benzene molecule, which served as a model of the CH/pi interaction in carbohydrate/protein complexes. Molecular recognition of carbohydrates by proteins plays a key role in many biological processes including immune response, pathogen entry into a cell, cell-cell adhesion and so forth. The list of proteins that recognise carbohydrates via aromatic residues include lectins, carbohydrate-binding modules, glycosidases, glycosyl transferases, “greasy slides” of carbohydrate transporters and complimentary sugar-binding sites (“sugar tongs”). Carbohydrates typically interact with aromatic systems in a parallel orientation. In this study we present the first systematic computational three-dimensional scan of carbohydrate hydrophobic patches for the ability to interact via CH/pi dispersion interactions. The carbohydrates b-D-glucopyranose, b-D-mannopyranose and a-L-fucopyranose were studied in a complex with a benzene molecule, which served as a model of the CH/pi interaction in carbohydrate/protein complexes. (en)
Title	Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings (en)
skos:prefLabel	Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings Carbohydrate CH/pi interactions – Theoretical investigation of the favourable regions in the carbohydrate surroundings (en)
skos:notation	RIV/00216224:14740/11:00049969!RIV12-GA0-14740___
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(GD301/09/H004), P(LC06030), Z(MSM0021622413)
http://linked.open...vai/riv/dodaniDat	2012
http://linked.open...aciTvurceVysledku	Matuška, Radek Kozmon, Stanislav Koča, Jaroslav
http://linked.open.../riv/druhVysledku	O - Ostatní výsledky nezařaditelné do žádného z výše uvedených druhů výsledku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Středoevropský technologický institut
http://linked.open...dnocenehoVysledku	189147
http://linked.open...ai/riv/idVysledku	RIV/00216224:14740/11:00049969
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	Carbohydrate; CH/pi interactions; DFT-D (en)
http://linked.open.../riv/klicoveSlovo	CH/pi interactions Carbohydrate DFT-D
http://linked.open...ontrolniKodProRIV	[D110F2F1E736]
http://linked.open...in/vavai/riv/obor	CF
http://linked.open...ichTvurcuVysledku	3 (xsd:int)
http://linked.open...cetTvurcuVysledku	4 (xsd:int)
http://linked.open...vavai/riv/projekt	Molecular and structural biology of selected antitumor drugs. From mechanistic studies to chemotherapy of tumors Biomolecular centre
http://linked.open...UplatneniVysledku	2011
http://linked.open...iv/tvurceVysledku	Koča, Jaroslav Kozmon, Stanislav Matuška, Radek Spiwok, Vojtěch
http://linked.open...n/vavai/riv/zamer	Proteiny v metabolismu a při interakci organismů s prostředím
http://localhost/t...ganizacniJednotka	14740

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