About: Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	In the field of biomedical image analysis, motion tracking and segmentation algorithms are important tools for time-resolved analysis of cell characteristics, events, and tracking. There are many algorithms in everyday use. Nevertheless, most of them is not properly validated as the ground truth (GT), which is a very important tool for the verification of image processing algorithms, is not naturally available. Many algorithms in this field of study are, therefore, validated only manually by an human expert. This is usually difficult, cumbersome and time consuming task, especially when single 3D image or even 3D image sequence is considered. In this paper, we have proposed a technique that generates time-lapse sequences of fully 3D synthetic image datasets. It includes generating shape, structure, and also motion of selected biological objects. The corresponding GT data is generated as well. The technique is focused on the generation of synthetic objects at various scales. In the field of biomedical image analysis, motion tracking and segmentation algorithms are important tools for time-resolved analysis of cell characteristics, events, and tracking. There are many algorithms in everyday use. Nevertheless, most of them is not properly validated as the ground truth (GT), which is a very important tool for the verification of image processing algorithms, is not naturally available. Many algorithms in this field of study are, therefore, validated only manually by an human expert. This is usually difficult, cumbersome and time consuming task, especially when single 3D image or even 3D image sequence is considered. In this paper, we have proposed a technique that generates time-lapse sequences of fully 3D synthetic image datasets. It includes generating shape, structure, and also motion of selected biological objects. The corresponding GT data is generated as well. The technique is focused on the generation of synthetic objects at various scales. (en)
Title	Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy (en)
skos:prefLabel	Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy Generation of Synthetic Image Datasets for Time-Lapse Fluorescence Microscopy (en)
skos:notation	RIV/00216224:14330/12:00057285!RIV13-GA0-14330___
http://linked.open...avai/riv/aktivita	P S
http://linked.open...avai/riv/aktivity	P(GBP302/12/G157), S
http://linked.open...vai/riv/dodaniDat	2013
http://linked.open...aciTvurceVysledku	Ulman, Vladimír Svoboda, David
http://linked.open.../riv/druhVysledku	D - Článek ve sborníku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Fakulta informatiky
http://linked.open...dnocenehoVysledku	137856
http://linked.open...ai/riv/idVysledku	RIV/00216224:14330/12:00057285
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	Simulation; Optical flow; 3D image sequences; Fluorescence optical microscopy (en)
http://linked.open.../riv/klicoveSlovo	Simulation 3D image sequences Fluorescence optical microscopy Optical flow
http://linked.open...ontrolniKodProRIV	[ADDF703BA1EE]
http://linked.open...v/mistoKonaniAkce	Aveiro, Portugal
http://linked.open...i/riv/mistoVydani	Heidelberg
http://linked.open...i/riv/nazevZdroje	Proceedings of 9th International Conference on Image Analysis and Recognition
http://linked.open...in/vavai/riv/obor	JD
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	2 (xsd:int)
http://linked.open...vavai/riv/projekt	Dynamics and Organization of Chromosomes in the Cell Cycle and during Differentiation under Normal and Pathological Conditions
http://linked.open...UplatneniVysledku	2012
http://linked.open...iv/tvurceVysledku	Svoboda, David Ulman, Vladimír
http://linked.open...vavai/riv/typAkce	WRD - Světová
http://linked.open.../riv/zahajeniAkce	2012-06-25 (xsd:date)
issn	0302-9743
number of pages	10 (xsd:int)
http://bibframe.org/vocab/doi	10.1007/978-3-642-31298-4_56
http://purl.org/ne...btex#hasPublisher	Springer-Verlag
https://schema.org/isbn	9783642312977
http://localhost/t...ganizacniJednotka	14330

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