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Description
  • In this paper a novel tool BioDiVinE for parallel analysis of biological models is presented. The tool allows analysis of biological models specified in terms of a set of chemical reactions. Chemical reactions are transformed into a system of multi-affine differential equations. BioDiVinE employs techniques for finite discrete abstraction of the continuous state space. At that level, parallel analysis algorithms based on model checking are provided. In the paper, the key tool features are described and their application is demonstrated by means of a case study.
  • In this paper a novel tool BioDiVinE for parallel analysis of biological models is presented. The tool allows analysis of biological models specified in terms of a set of chemical reactions. Chemical reactions are transformed into a system of multi-affine differential equations. BioDiVinE employs techniques for finite discrete abstraction of the continuous state space. At that level, parallel analysis algorithms based on model checking are provided. In the paper, the key tool features are described and their application is demonstrated by means of a case study. (en)
Title
  • BioDiVinE: A Framework for Parallel Analysis of Biological Models
  • BioDiVinE: A Framework for Parallel Analysis of Biological Models (en)
skos:prefLabel
  • BioDiVinE: A Framework for Parallel Analysis of Biological Models
  • BioDiVinE: A Framework for Parallel Analysis of Biological Models (en)
skos:notation
  • RIV/00216224:14330/09:00028618!RIV11-GA0-14330___
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(1ET408050503), P(GA201/09/1389), P(GP201/09/P497), S, Z(MSM0021622419)
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 305137
http://linked.open...ai/riv/idVysledku
  • RIV/00216224:14330/09:00028618
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • model checking; multi-affine systems; dynamic systems; rectangular abstraction (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...ontrolniKodProRIV
  • [5A9D8562EA6E]
http://linked.open...v/mistoKonaniAkce
  • Eindhoven
http://linked.open...i/riv/mistoVydani
  • Neuveden
http://linked.open...i/riv/nazevZdroje
  • Proceedings of 2nd International Workshop on Computational Models for Cell Processes
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...iv/tvurceVysledku
  • Barnat, Jiří
  • Brim, Luboš
  • Fabriková, Jana
  • Černá, Ivana
  • Šafránek, David
  • Dražan, Sven
  • Láník, Jan
  • Hongwu, Ma
http://linked.open...vavai/riv/typAkce
http://linked.open.../riv/zahajeniAkce
http://linked.open...n/vavai/riv/zamer
issn
  • 2075-2180
number of pages
http://purl.org/ne...btex#hasPublisher
  • EPTCS
http://localhost/t...ganizacniJednotka
  • 14330
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