About: CAVER Viewer

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	CAVER Viewer application for protein visualization was developed in cooperation with Loschmidt Laboratories, Faculty of Science, Masaryk University. The main goal of this research is to analyze protein molecules and to detect so called channels in them. Channels are paths leading from the outside part of the molecule to so called active site of protein. In this active site important chemical reactions can undergo. After channel detection the transportation of small molecule of substrate into the active site follows. The result of the chemical reaction between protein and substrate can be a product which forms the basis of some new medication. The main contribution of the CAVER Viewer application is the automatic detection of all possible channels in protein and their exploration using novel visualization methods implemented in this program. So it is possible to eliminate the inconvenient channels and accelerate the process of drug design. CAVER Viewer application for protein visualization was developed in cooperation with Loschmidt Laboratories, Faculty of Science, Masaryk University. The main goal of this research is to analyze protein molecules and to detect so called channels in them. Channels are paths leading from the outside part of the molecule to so called active site of protein. In this active site important chemical reactions can undergo. After channel detection the transportation of small molecule of substrate into the active site follows. The result of the chemical reaction between protein and substrate can be a product which forms the basis of some new medication. The main contribution of the CAVER Viewer application is the automatic detection of all possible channels in protein and their exploration using novel visualization methods implemented in this program. So it is possible to eliminate the inconvenient channels and accelerate the process of drug design. (en)
Title	CAVER Viewer CAVER Viewer (en)
skos:prefLabel	CAVER Viewer CAVER Viewer (en)
skos:notation	RIV/00216224:14330/08:00025316!RIV10-GA0-14330___
http://linked.open...avai/riv/aktivita	P S
http://linked.open...avai/riv/aktivity	P(GA201/07/0927), S
http://linked.open...vai/riv/dodaniDat	2010
http://linked.open...aciTvurceVysledku	Sochor, Jiří
http://linked.open.../riv/druhVysledku	R - Software
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Fakulta informatiky
http://linked.open...dnocenehoVysledku	358957
http://linked.open...ai/riv/idVysledku	RIV/00216224:14330/08:00025316
http://linked.open...terniIdentifikace	CAVER Viewer 1.0
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	protein; channel; visualization (en)
http://linked.open.../riv/klicoveSlovo	channel protein visualization
http://linked.open...ontrolniKodProRIV	[53B2B33E142A]
http://linked.open...okalizaceVysledku	http://loschmidt.chemi.muni.cz/caver/index.php?page=OnlineCAVER
http://linked.open...in/vavai/riv/obor	IN
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	1 (xsd:int)
http://linked.open...vavai/riv/projekt	Visualization of protein structures
http://linked.open...UplatneniVysledku	2008
http://linked.open...echnickeParametry	Program pro analýzu a vizualizaci proteinů, platformy Windows, Linux, Mac OS, programovací jazyk Java,
http://linked.open...iv/tvurceVysledku	Sochor, Jiří
http://linked.open...avai/riv/vlastnik	Masarykova univerzita
http://linked.open...itiJinymSubjektem	N - Nabytí licence není nutné (výsledek není licencován)
http://localhost/t...ganizacniJednotka	14330

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