About: The role of alternative splicing in auxin and cytokinin pathways

Facets (new session)
Description
Metadata
Settings
- owl:sameAs
- Inference Rule:

About: The role of alternative splicing in auxin and cytokinin pathways Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Alternative splicing is a tightly regulated process accompanying gene expression. It leads to multiple protein variants from a single primary transcipt. Transcriptome sequencing revealed that >60 % of Arabidopsis genes are alternatively spliced. This raises the question if all the identified isoforms have biologically functional relevance. Our aim is to answer this question for three members of auxin and cytokinin pathways: PIN4 (PINFORMED 4), PIN7 and AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6), where all of them are known to be processed into more alternatively spliced mRNAs. PIN4 and PIN7 are processed into two isoforms called a and b, respectively, which differ in their subcellular localization. Also two isoforms of AHP6 have been described, AHP6b and AHP6a. We found that both of them are expressed as stable proteins and are actively transported into nuclei. Alternative splicing is a tightly regulated process accompanying gene expression. It leads to multiple protein variants from a single primary transcipt. Transcriptome sequencing revealed that >60 % of Arabidopsis genes are alternatively spliced. This raises the question if all the identified isoforms have biologically functional relevance. Our aim is to answer this question for three members of auxin and cytokinin pathways: PIN4 (PINFORMED 4), PIN7 and AHP6 (ARABIDOPSIS HISTIDINE PHOSPHOTRANSFER PROTEIN 6), where all of them are known to be processed into more alternatively spliced mRNAs. PIN4 and PIN7 are processed into two isoforms called a and b, respectively, which differ in their subcellular localization. Also two isoforms of AHP6 have been described, AHP6b and AHP6a. We found that both of them are expressed as stable proteins and are actively transported into nuclei. (en)
Title	The role of alternative splicing in auxin and cytokinin pathways The role of alternative splicing in auxin and cytokinin pathways (en)
skos:prefLabel	The role of alternative splicing in auxin and cytokinin pathways The role of alternative splicing in auxin and cytokinin pathways (en)
skos:notation	RIV/00216224:14310/14:00077162!RIV15-MSM-14310___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(EE2.3.20.0189)
http://linked.open...vai/riv/dodaniDat	2015
http://linked.open...aciTvurceVysledku	Hejátko, Jan Růžička, Kamil Hrtyan, Mónika Šliková, Eva
http://linked.open.../riv/druhVysledku	O - Ostatní výsledky nezařaditelné do žádného z výše uvedených druhů výsledku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Přírodovědecká fakulta
http://linked.open...dnocenehoVysledku	43078
http://linked.open...ai/riv/idVysledku	RIV/00216224:14310/14:00077162
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	alternative splicing; PIN; AHP6; cell plate (en)
http://linked.open.../riv/klicoveSlovo	PIN AHP6 cell plate alternative splicing
http://linked.open...ontrolniKodProRIV	[147A3922EF5A]
http://linked.open...in/vavai/riv/obor	CE
http://linked.open...ichTvurcuVysledku	4 (xsd:int)
http://linked.open...cetTvurcuVysledku	4 (xsd:int)
http://linked.open...vavai/riv/projekt	Development of excellence in evolutionary cytogenomics, epigenetics and cell signalling
http://linked.open...UplatneniVysledku	2014
http://linked.open...iv/tvurceVysledku	Hejátko, Jan Hrtyan, Mónika Růžička, Kamil Šliková, Eva
http://localhost/t...ganizacniJednotka	14310

Faceted Search & Find service v1.16.118 as of Jun 21 2024

Alternative Linked Data Documents: ODE Content Formats:

RDF

ODATA

Microdata

About

OpenLink Virtuoso version 07.20.3240 as of Jun 21 2024, on Linux (x86_64-pc-linux-gnu), Single-Server Edition (126 GB total memory, 48 GB memory in use)
Data on this page belongs to its respective rights holders.
Virtuoso Faceted Browser Copyright © 2009-2024 OpenLink Software