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  • The gram-negative bacterium Ralstonia solanacearum produces a potent L-fucose binding lectin (RSL). This work is focused on in silico mutagenesis, docking of fucose and fucosylated oligosaccharides in RSL lectin. Binding energy pattern of various saccharides was investigated by a series of docking simulations. Docking experiments were performed using the software AutoDock 3, AutoDock Vina, DOCK v.6.2 and ICM Dock. Performance of various docking programs will be discussed with respect to binding energy of those saccharides measured from SPR experiment.
  • The gram-negative bacterium Ralstonia solanacearum produces a potent L-fucose binding lectin (RSL). This work is focused on in silico mutagenesis, docking of fucose and fucosylated oligosaccharides in RSL lectin. Binding energy pattern of various saccharides was investigated by a series of docking simulations. Docking experiments were performed using the software AutoDock 3, AutoDock Vina, DOCK v.6.2 and ICM Dock. Performance of various docking programs will be discussed with respect to binding energy of those saccharides measured from SPR experiment. (en)
Title
  • In silico mutagenesis and docking study of RSL lectin
  • In silico mutagenesis and docking study of RSL lectin (en)
skos:prefLabel
  • In silico mutagenesis and docking study of RSL lectin
  • In silico mutagenesis and docking study of RSL lectin (en)
skos:notation
  • RIV/00216224:14310/10:00043733!RIV11-MSM-14310___
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(LC06030), P(ME08008), S, Z(MSM0021622413)
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 263276
http://linked.open...ai/riv/idVysledku
  • RIV/00216224:14310/10:00043733
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Docking; In silico mutagenesis; fucosylated oligosaccharides; Lectin-saccharide interactions; Binding energy. (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...ontrolniKodProRIV
  • [016618C5BE85]
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...iv/tvurceVysledku
  • Adam, Jan
  • Koča, Jaroslav
  • Wimmerová, Michaela
  • Abagyan, Ruben A.
  • Mishra, Sushil Kumar
http://linked.open...n/vavai/riv/zamer
http://localhost/t...ganizacniJednotka
  • 14310
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